RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 APBB1IPQ7Z5R6 666 aaPredicted RBP8.39□□□□□ -1.07
ABCD4-220ENST00000553998 GPBP1Q86WP2 473 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 CEP57L1Q8IYX8 460 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 APPL2Q8NEU8 664 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 GATA6Q92908 595 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 DNAJC25Q9H1X3 360 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 TOPORSQ9NS56 1045 aaPredicted RBP8.39□□□□□ -1.07
ABCD4-220ENST00000553998 GTSE1Q9NYZ3 720 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 CNTN3Q9P232 1028 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 ASB3Q9Y575 518 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 DMXL2Q8TDJ6 3036 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 SOBPA7XYQ1 873 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 M0QZQ0 153 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ABLIM1O14639 778 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 TRDMT1O14717 391 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 MEFVO15553 781 aaPredicted RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 HIP1RO75146 1068 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ZNF202O95125 648 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 FGF19O95750 216 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 KRT18P05783 430 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 CEACAM1P13688 526 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 CSRP1P21291 193 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 KCNA4P22459 653 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 PROZP22891 400 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ZNF131P52739 623 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 YARSP54577 528 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ARPP19P56211 112 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 FAM160A1Q05DH4 1040 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 MAPK7Q13164 816 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 GPR17Q13304 367 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 DMP1Q13316 513 aaPredicted RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 PLD1Q13393 1074 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 CCDC6Q16204 474 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 TMEM196Q5HYL7 178 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 PKN3Q6P5Z2 889 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 GAREM2Q75VX8 874 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 HAUS6Q7Z4H7 955 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ELOA2Q8IYF1 753 aaPredicted RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 DAW1Q8N136 415 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 DEPTORQ8TB45 409 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 DDX12PQ92771 950 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 KCNN1Q92952 543 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 IFT74Q96LB3 600 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 TIGD1Q96MW7 591 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 TMEM209Q96SK2 561 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 ACO2Q99798 780 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 CCDC94Q9BW85 323 aaPredicted RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 TRIM9Q9C026 710 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 DUSP15Q9H1R2 295 aaPredicted RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 CDT1Q9H211 546 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 GOLPH3LQ9H4A5 285 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 LARSQ9P2J5 1176 aaKnown RBP8.38□□□□□ -1.07
ABCD4-220ENST00000553998 HSFX1Q9UBD0 423 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 EBF1Q9UH73 591 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 PCDHB8Q9UN66 801 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 YIPF1Q9Y548 306 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 IGF2RP11717 2491 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 PKD1L2Q7Z442 2459 aa8.38□□□□□ -1.07
ABCD4-220ENST00000553998 BCLAF3A2AJT9 711 aaKnown RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 MYMKA6NI61 221 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 SRRM3A6NNA2 597 aaPredicted RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 H0YCG3 227 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 TBCAO75347 108 aaKnown RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 FAM13AO94988 1023 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 CCDC192P0DO97 292 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 MCF2P10911 925 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 PLS3P13797 630 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 GAP43P17677 238 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 ABCD1P33897 745 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 AARSP49588 968 aaKnown RBP eCLIP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 NOVA1P51513 510 aaKnown RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 SMTNP53814 917 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 DHX8Q14562 1220 aaKnown RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 TMEM132AQ24JP5 1023 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 ITPRIPL2Q3MIP1 535 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 STXBP5Q5T5C0 1151 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 DAB2IPQ5VWQ8 1189 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 CENPPQ6IPU0 288 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 FSTL4Q6MZW2 842 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 KRBA2Q6ZNG9 492 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 CEP120Q8N960 986 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 ENGASEQ8NFI3 743 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 BPIFB1Q8TDL5 484 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 PSMG2Q969U7 264 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 DNAJC19Q96DA6 116 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 CHFRQ96EP1 664 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 C7orf25Q9BPX7 421 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 FAM83CQ9BQN1 747 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 REEP2Q9BRK0 252 aa8.37□□□□□ -1.07
ABCD4-220ENST00000553998 NTPCRQ9BSD7 190 aaKnown RBP8.37□□□□□ -1.07
ABCD4-220ENST00000553998 ADAM33Q9BZ11 813 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms