RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PTPRHQ9HD43 1115 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 HSFX1Q9UBD0 423 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 OPHN1O60890 802 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 CFIP05156 583 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 HSPA4P34932 840 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 DPP6P42658 865 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 PTGER3P43115 390 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 MYBPC2Q14324 1141 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 VEPH1Q14D04 833 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 TAF12Q16514 161 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 TTC30AQ86WT1 665 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 CATSPER3Q86XQ3 398 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 CPA6Q8N4T0 437 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 MAB21L3Q8N8X9 362 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 OLIG1Q8TAK6 271 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 ADAMTS14Q8WXS8 1223 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 KCNB2Q92953 911 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 ECT2Q9H8V3 914 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 KIF9Q9HAQ2 790 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 POLD4Q9HCU8 107 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 FSCN3Q9NQT6 498 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 TDP1Q9NUW8 608 aa15.04■□□□□ -0
PRPF39-204ENST00000553605 CIZ1Q9ULV3 898 aaPredicted RBP15.04■□□□□ -0
PRPF39-204ENST00000553605 LARGE1O95461 756 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 P2RY2P41231 377 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 TUFMP49411 452 aaKnown RBP15.03■□□□□ -0
PRPF39-204ENST00000553605 TRIP6Q15654 476 aaKnown RBP15.03■□□□□ -0
PRPF39-204ENST00000553605 C2orf27AQ580R0 203 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 ARMCX5Q6P1M9 558 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 CPLX2Q6PUV4 134 aaKnown RBP15.03■□□□□ -0
PRPF39-204ENST00000553605 RIN3Q8TB24 985 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 USP33Q8TEY7 942 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 RLN3Q8WXF3 142 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 FNBP1Q96RU3 617 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 SEPT5Q99719 369 aaPredicted RBP15.03■□□□□ -0
PRPF39-204ENST00000553605 TCHPQ9BT92 498 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 TUFT1Q9NNX1 390 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 TUBGCP4Q9UGJ1 667 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 PILRBQ9UKJ0 227 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 SLC6A14Q9UN76 642 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 MAST4O15021 2626 aa15.03■□□□□ -0
PRPF39-204ENST00000553605 ATXN2Q99700 1313 aaKnown RBP15.02■□□□□ -0
PRPF39-204ENST00000553605 ARHGEF35A5YM69 484 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 FAM205CA6NFA0 338 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 MED24O75448 989 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 ALDH1A2O94788 518 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 MCF2P10911 925 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 CD59P13987 128 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 XBP1P17861 261 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 ATF6P18850 670 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 GFPT1Q06210 699 aaPredicted RBP15.02■□□□□ -0
PRPF39-204ENST00000553605 CRY1Q16526 586 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 DUOXA1Q1HG43 343 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 MGAT5BQ3V5L5 792 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 SPDYCQ5MJ68 293 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 LYSMD4Q5XG99 296 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 OVOS1Q6IE37 1185 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 DSTYKQ6XUX3 929 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 FRMD1Q8N878 549 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 PNPLA1Q8N8W4 532 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 CEP76Q8TAP6 659 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 GIPC2Q8TF65 315 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 SPACA7Q96KW9 195 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 MRPL4Q9BYD3 311 aaKnown RBP15.02■□□□□ -0
PRPF39-204ENST00000553605 GJB4Q9NTQ9 266 aa15.02■□□□□ -0
PRPF39-204ENST00000553605 PRB1P04280 392 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 ITPKAP23677 461 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 DDX6P26196 483 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 HOXD12P35452 270 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 AARSP49588 968 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 SEC13P55735 322 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 SLC10A6Q3KNW5 377 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 PEAR1Q5VY43 1037 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 LMBRD2Q68DH5 695 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 TMEM150AQ86TG1 271 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 TMEM130Q8N3G9 435 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 MINDY1Q8N5J2 469 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 CCDC33Q8N5R6 958 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 KIFAP3Q92845 792 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 CAMK1GQ96NX5 476 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 TARS2Q9BW92 718 aaKnown RBP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 DUS2Q9NX74 493 aaKnown RBP15.01□□□□□ -0.01
PRPF39-204ENST00000553605 MMP17Q9ULZ9 603 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 PCDHB9Q9Y5E1 797 aa15.01□□□□□ -0.01
PRPF39-204ENST00000553605 MYO16Q9Y6X6 1858 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 CYSRT1A8MQ03 144 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 K7EQS6 105 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 F11P03951 625 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 SERPINF2P08697 491 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 FTH1P19P0C7X4 201 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 HARSP12081 509 aaKnown RBP15□□□□□ -0.01
PRPF39-204ENST00000553605 TYMPP19971 482 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 PROZP22891 400 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 PSMA5P28066 241 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 LRPAP1P30533 357 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 PI4KAP42356 2102 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 CDR1P51861 262 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 NLRP12P59046 1061 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms