RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 RAB33AQ14088 237 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 TOB2Q14106 344 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 CTTNQ14247 550 aaKnown RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 PABPC1LQ4VXU2 614 aaKnown RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 XKR9Q5GH70 373 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 AXDND1Q5T1B0 1012 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 FAM171A1Q5VUB5 890 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 PPP4R3AQ6IN85 833 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 BLOC1S2Q6QNY1 142 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 KRT25Q7Z3Z0 450 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 HACE1Q8IYU2 909 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 NETO1Q8TDF5 533 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 ING5Q8WYH8 240 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 DNASE1L2Q92874 299 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 SECISBP2LQ93073 1101 aaKnown RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 DYDC2Q96IM9 177 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 TRIM6Q9C030 488 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 ZSWIM4Q9H7M6 989 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 MTRRQ9UBK8 725 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 GMEB2Q9UKD1 530 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 LAMA5O15230 3695 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 NCANO14594 1321 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 KIAA1549LQ6ZVL6 1849 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 DENND4CQ5VZ89 1909 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 TMEM189-UBE2V1I3L0A0 370 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 LRP3O75074 770 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 LYPLA2O95372 231 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 DEXIO95424 95 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 EDN1P05305 212 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 RHOP08100 348 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 RARAP10276 462 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 GCFC2P16383 781 aaKnown RBP8.04□□□□□ -1.12
ATXN3-219ENST00000553488 IGFBP6P24592 240 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-219ENST00000553488 NRLP54845 237 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 TFDP1Q14186 410 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 PCSK7Q16549 785 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 PPM1JQ5JR12 505 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 PRSS36Q5K4E3 855 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 CDCA2Q69YH5 1023 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-219ENST00000553488 LAIR1Q6GTX8 287 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 NCAPH2Q6IBW4 605 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 TANGO2Q6ICL3 276 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 GALNT17Q6IS24 598 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 CD300LGQ6UXG3 332 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-219ENST00000553488 ZNF852Q6ZMS4 543 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 OTUD6AQ7L8S5 288 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 NEK8Q86SG6 692 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 NELL2Q99435 816 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 IER2Q9BTL4 223 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 PDZD7Q9H5P4 517 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 GDE1Q9NZC3 331 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 FRRS1LQ9P0K9 344 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 PARP2Q9UGN5 583 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 SMG1Q96Q15 3661 aaKnown RBP8.04□□□□□ -1.12
ATXN3-219ENST00000553488 MYO16Q9Y6X6 1858 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 ATG2BQ96BY7 2078 aa8.04□□□□□ -1.12
ATXN3-219ENST00000553488 TSC2P49815 1807 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 ANK1P16157 1881 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 ARHGEF37A1IGU5 675 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 NCAM2O15394 837 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 CDC45O75419 566 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 RECQL4O94761 1208 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 SLITRK3O94933 977 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 OR1D2P34982 312 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 SOX18P35713 384 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 RARRES1P49788 294 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 ELAVL2Q12926 359 aaKnown RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 LPAL2Q16609 132 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 FAM187BQ17R55 369 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 EARS2Q5JPH6 523 aaKnown RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 PDXDC1Q6P996 788 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 RTL10Q7L3V2 364 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 CEP57Q86XR8 500 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 C3orf58Q8NDZ4 430 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 TTC9Q92623 222 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 ELSPBP1Q96BH3 223 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 MCRS1Q96EZ8 462 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 HSD17B14Q9BPX1 270 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 POLR3FQ9H1D9 316 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 SLKQ9H2G2 1235 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 PRMT7Q9NVM4 692 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 FAM13BQ9NYF5 915 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 KCNJ14Q9UNX9 436 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 MRPS17Q9Y2R5 130 aaKnown RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 MRPS23Q9Y3D9 190 aaKnown RBP8.03□□□□□ -1.12
ATXN3-219ENST00000553488 CDY1Q9Y6F8 540 aa8.03□□□□□ -1.12
ATXN3-219ENST00000553488 OBSL1O75147 1896 aa8.02□□□□□ -1.12
ATXN3-219ENST00000553488 ITPR1Q14643 2758 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 NUP205Q92621 2012 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 CCDC194A0A1B0GVG4 234 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms