RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
DDX54-206ENST00000549271 ACAP3Q96P50 834 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 HHIPQ96QV1 700 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 TARS2Q9BW92 718 aaKnown RBP13.26□□□□□ -0.29
DDX54-206ENST00000549271 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 EBF1Q9UH73 591 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 PTPRDP23468 1912 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 VWA3AA6NCI4 1184 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
DDX54-206ENST00000549271 TRDMT1O14717 391 aaKnown RBP13.25□□□□□ -0.29
DDX54-206ENST00000549271 VNN2O95498 520 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 SYT1P21579 422 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 IRX4P78413 519 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 CTXN3Q4LDR2 81 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 PMS2CLQ68D20 193 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 RNF19BQ6ZMZ0 732 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 BBC3Q96PG8 261 aaPredicted RBP13.25□□□□□ -0.29
DDX54-206ENST00000549271 RUSC1Q9BVN2 902 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 YIPF1Q9Y548 306 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.25□□□□□ -0.29
DDX54-206ENST00000549271 KALRNO60229 2985 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
DDX54-206ENST00000549271 ACACAQ13085 2346 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
DDX54-206ENST00000549271 DPYSL4O14531 572 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 MEFVO15553 781 aaPredicted RBP13.24□□□□□ -0.29
DDX54-206ENST00000549271 RNF40O75150 1001 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 TOM1L1O75674 476 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 PDCP20941 246 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 WEE1P30291 646 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 OSTNP61366 133 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 GRIN1Q05586 938 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDX54-206ENST00000549271 PTPAQ15257 358 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 COL28A1Q2UY09 1125 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 ZNF280DQ6N043 979 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 GAREM2Q75VX8 874 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 PIP4P1Q86T03 277 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 BPIFB1Q8TDL5 484 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 LRRC15Q8TF66 581 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 SNX21Q969T3 373 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 SUSD3Q96L08 255 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 SLC32A1Q9H598 525 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
DDX54-206ENST00000549271 MYH11P35749 1972 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 SPAARA0A1B0GVQ0 90 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 APBB3O95704 486 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 EGFP01133 1207 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 PLS3P13797 630 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 GBP1P32455 592 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 RESTQ13127 1097 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 PLD1Q13393 1074 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDX54-206ENST00000549271 SF3A1Q15459 793 aaKnown RBP13.23□□□□□ -0.29
DDX54-206ENST00000549271 SLC10A6Q3KNW5 377 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 SYT13Q7L8C5 426 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 C11orf74Q86VG3 221 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 SYT2Q8N9I0 419 aaPredicted RBP13.23□□□□□ -0.29
DDX54-206ENST00000549271 TMEM161BQ8NDZ6 487 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 APPL2Q8NEU8 664 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 PLIN2Q99541 437 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 FAM83CQ9BQN1 747 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 CRISPLD1Q9H336 500 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 PLEKHA5Q9HAU0 1116 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
DDX54-206ENST00000549271 EVLQ9UI08 416 aaPredicted RBP13.23□□□□□ -0.29
DDX54-206ENST00000549271 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 CLIC4Q9Y696 253 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
DDX54-206ENST00000549271 PLXNB3Q9ULL4 1909 aa13.23□□□□□ -0.29
DDX54-206ENST00000549271 OTOL1A6NHN0 477 aaPredicted RBP13.22□□□□□ -0.29
DDX54-206ENST00000549271 UPK3BL1B0FP48 263 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 UPK3BL2E5RIL1 263 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 H0Y626 953 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 SLC16A4O15374 487 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 TRIM16O95361 564 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
DDX54-206ENST00000549271 CPB1P15086 417 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 SMTNP53814 917 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 SLC12A3P55017 1021 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 SIM1P81133 766 aaPredicted RBP13.22□□□□□ -0.29
DDX54-206ENST00000549271 MCL1Q07820 350 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 STRN3Q13033 797 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 ZRSR1Q15695 479 aaKnown RBP13.22□□□□□ -0.29
DDX54-206ENST00000549271 GPR158Q5T848 1215 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 DDX12PQ92771 950 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 C18orf25Q96B23 403 aaPredicted RBP13.22□□□□□ -0.29
DDX54-206ENST00000549271 ZBTB45Q96K62 511 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms