RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 USP39Q53GS9 565 aaKnown RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 XKR4Q5GH76 650 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 CD300LGQ6UXG3 332 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 ALKAL1Q6UXT8 129 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 CCNI2Q6ZMN8 369 aaPredicted RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 ZNF605Q86T29 641 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 CEP120Q8N960 986 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 C3orf58Q8NDZ4 430 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 EXOC4Q96A65 974 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 ACDQ96AP0 544 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 RSPRY1Q96DX4 576 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 BICD1Q96G01 975 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 CDK5RAP3Q96JB5 506 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 SUSD3Q96L08 255 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 TBC1D32Q96NH3 1257 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 OXCT2Q9BYC2 517 aaPredicted RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 GTSE1Q9NYZ3 720 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 CNTN3Q9P232 1028 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 AFF4Q9UHB7 1163 aaKnown RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 USP9XQ93008 2570 aaPredicted RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 THADAQ6YHU6 1953 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 MYH11P35749 1972 aa9.21□□□□□ -0.93
TROAP-208ENST00000548817 PTPN13Q12923 2485 aa9.21□□□□□ -0.93
TROAP-208ENST00000548817 A0A087WV48 116 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 PATE3B3GLJ2 98 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 DPYSL4O14531 572 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 TRDMT1O14717 391 aaKnown RBP9.21□□□□□ -0.94
TROAP-208ENST00000548817 DCLK1O15075 740 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 ATXN7O15265 892 aaPredicted RBP9.21□□□□□ -0.94
TROAP-208ENST00000548817 TOM1L1O75674 476 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 C1QL1O75973 258 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 SEC24AO95486 1093 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 DRD1P21728 446 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 IGFBP6P24592 240 aaPredicted RBP9.21□□□□□ -0.94
TROAP-208ENST00000548817 WEE1P30291 646 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 ALDH1A3P47895 512 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 EPHB3P54753 998 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 TWF1Q12792 350 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 MRPL58Q14197 206 aaKnown RBP9.21□□□□□ -0.94
TROAP-208ENST00000548817 NOLC1Q14978 699 aaKnown RBP eCLIP9.21□□□□□ -0.94
TROAP-208ENST00000548817 TEAD2Q15562 447 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 KYAT1Q16773 422 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 TRIM61Q5EBN2 209 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 FSTL4Q6MZW2 842 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 RINT1Q6NUQ1 792 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 DSTYKQ6XUX3 929 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 ABCA7Q8IZY2 2146 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 HDDC3Q8N4P3 179 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 C4orf32Q8N8J7 132 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 IGSF22Q8N9C0 903 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 SHKBP1Q8TBC3 707 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 SLC39A7Q92504 469 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 DDX12PQ92771 950 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 C18orf25Q96B23 403 aaPredicted RBP9.21□□□□□ -0.94
TROAP-208ENST00000548817 HHIPQ96QV1 700 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 PLEKHA5Q9HAU0 1116 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 PTPRHQ9HD43 1115 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 ARHGAP28Q9P2N2 729 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 PCDHB8Q9UN66 801 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
TROAP-208ENST00000548817 KIF26AQ9ULI4 1882 aaPredicted RBP9.21□□□□□ -0.94
TROAP-208ENST00000548817 SFI1A8K8P3 1242 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 J3QKU1 62 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 TNFRSF10BO14763 440 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 RNF40O75150 1001 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 CLTAP09496 248 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 PLS3P13797 630 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 ENGP17813 658 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 PRPHP41219 470 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 MAPK8P45983 427 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 YWHAHQ04917 246 aaPredicted RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 PPP2R3AQ06190 1150 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 RAD51AP2Q09MP3 1159 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 NBR1Q14596 966 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 ARHGAP15Q53QZ3 475 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 SPDYCQ5MJ68 293 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 MCTP1Q6DN14 999 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 SLC23A3Q6PIS1 610 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 ZPBP2Q6X784 338 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 C1orf186Q6ZWK4 172 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 ARID3BQ8IVW6 561 aaPredicted RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 HS6ST3Q8IZP7 471 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 CCDC26Q8TAB7 109 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 PIGKQ92643 395 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 ZBTB45Q96K62 511 aaPredicted RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 ZMAT2Q96NC0 199 aaKnown RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 NTPCRQ9BSD7 190 aaKnown RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 RUSC1Q9BVN2 902 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 THG1LQ9NWX6 298 aaKnown RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 CEP72Q9P209 647 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 LARSQ9P2J5 1176 aaKnown RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 UBQLN1Q9UMX0 589 aaKnown RBP9.2□□□□□ -0.94
TROAP-208ENST00000548817 PI4KAP42356 2102 aa9.2□□□□□ -0.94
TROAP-208ENST00000548817 SHROOM3Q8TF72 1996 aa9.19□□□□□ -0.94
TROAP-208ENST00000548817 OR6C75A6NL08 312 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms