RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 WISP1O95388 367 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 CAPSQ13938 189 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 PTPAQ15257 358 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 NAB2Q15742 525 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 ARHGAP29Q52LW3 1261 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 PADI6Q6TGC4 694 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 TMPRSS7Q7RTY8 843 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 TCEAL8Q8IYN2 117 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 FRMD1Q8N878 549 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 FAM181AQ8N9Y4 354 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
PTCH1-217ENST00000548420 AK8Q96MA6 479 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 LRRC3Q9BY71 257 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 CSRNP2Q9H175 543 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 MORC2Q9Y6X9 1032 aaPredicted RBP15.28■□□□□ 0.04
PTCH1-217ENST00000548420 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 VWA3AA6NCI4 1184 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 PRRG1O14668 218 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 PTGESO14684 152 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 SLC26A4O43511 780 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 OPHN1O60890 802 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 TKTP29401 623 aaKnown RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 GRSF1Q12849 480 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 HNRNPDQ14103 355 aaKnown RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 TFDP1Q14186 410 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 SF3A1Q15459 793 aaKnown RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 AMHR2Q16671 573 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 USP39Q53GS9 565 aaKnown RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 SYT12Q8IV01 421 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 HSCBQ8IWL3 235 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 MINDY1Q8N5J2 469 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 RPLP0P6Q8NHW5 317 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 CCDC43Q96MW1 224 aaKnown RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 PNMA5Q96PV4 448 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 FNBP1Q96RU3 617 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 SEMA4CQ9C0C4 833 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 BHMT2Q9H2M3 363 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-217ENST00000548420 CYP4F11Q9HBI6 524 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 GPRC5CQ9NQ84 441 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 DNM3Q9UQ16 869 aa15.27■□□□□ 0.04
PTCH1-217ENST00000548420 UBR5O95071 2799 aaPredicted RBP15.26■□□□□ 0.03
PTCH1-217ENST00000548420 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 ANTXRLA6NF34 631 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 E9PMD0 336 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 TNFRSF10BO14763 440 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 CAPN9O14815 690 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 KRT38O76015 456 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 ATF2P15336 505 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 MBTD1Q05BQ5 628 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 MAPK6Q16659 721 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 ITPRIPL2Q3MIP1 535 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 COLEC12Q5KU26 742 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 SLC8B1Q6J4K2 584 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 FCRL3Q96P31 734 aaPredicted RBP15.26■□□□□ 0.03
PTCH1-217ENST00000548420 SLITRK6Q9H5Y7 841 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 DNMT3LQ9UJW3 386 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 PILRBQ9UKJ0 227 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 CLIC4Q9Y696 253 aa15.26■□□□□ 0.03
PTCH1-217ENST00000548420 NUP210Q8TEM1 1887 aaPredicted RBP15.25■□□□□ 0.03
PTCH1-217ENST00000548420 A0A1W2PRU2 124 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 I3L4J1 428 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 GJB3O75712 270 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 AXLP30530 894 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 ELF1P32519 619 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 LONP1P36776 959 aaKnown RBP15.25■□□□□ 0.03
PTCH1-217ENST00000548420 GRIN1Q05586 938 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 ELAVL2Q12926 359 aaKnown RBP15.25■□□□□ 0.03
PTCH1-217ENST00000548420 TMEM119Q4V9L6 283 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 PEAR1Q5VY43 1037 aaPredicted RBP15.25■□□□□ 0.03
PTCH1-217ENST00000548420 CDCA2Q69YH5 1023 aaPredicted RBP15.25■□□□□ 0.03
PTCH1-217ENST00000548420 FAM173BQ6P4H8 233 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 NOTUMQ6P988 496 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 C1orf186Q6ZWK4 172 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 C11orf74Q86VG3 221 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 RASSF3Q86WH2 238 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 RLN3Q8WXF3 142 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 BSNDQ8WZ55 320 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 CAPN10Q9HC96 672 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 HPS4Q9NQG7 708 aa15.25■□□□□ 0.03
PTCH1-217ENST00000548420 PRAMEF12O95522 483 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 NTRK1P04629 796 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 CFIP05156 583 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 PRKCBP05771 671 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 ITPKAP23677 461 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 GALK1P51570 392 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 TWF1Q12792 350 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 FAM187BQ17R55 369 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 RINT1Q6NUQ1 792 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 TMC8Q8IU68 726 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 SYT2Q8N9I0 419 aaPredicted RBP15.24■□□□□ 0.03
PTCH1-217ENST00000548420 OLIG1Q8TAK6 271 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 KIFAP3Q92845 792 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 ZNF512Q96ME7 567 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms