RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CNTN3Q9P232 1028 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 PIN4Q9Y237 131 aaKnown RBP22.18■■□□□ 1.14
RITA1-201ENST00000548278 PDCD11Q14690 1871 aaKnown RBP22.17■■□□□ 1.14
RITA1-201ENST00000548278 RECQL4O94761 1208 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 PSMC4P43686 418 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 GJA9P57773 515 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 TAP1Q03518 808 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 MYO1EQ12965 1108 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 ALS2CLQ60I27 953 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 C12orf50Q8NA57 414 aaPredicted RBP22.17■■□□□ 1.14
RITA1-201ENST00000548278 TRIB2Q92519 343 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 TRIM6Q9C030 488 aaPredicted RBP22.17■■□□□ 1.14
RITA1-201ENST00000548278 TUBGCP4Q9UGJ1 667 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 STRIP2Q9ULQ0 834 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 GABRQQ9UN88 632 aa22.17■■□□□ 1.14
RITA1-201ENST00000548278 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.17■■□□□ 1.14
RITA1-201ENST00000548278 PPEF2O14830 753 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 KPNA6O60684 536 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 MICAL2O94851 1124 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 VDRP11473 427 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 NDST1P52848 882 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 OGDHQ02218 1023 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 CNGA2Q16280 664 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 UBXN11Q5T124 520 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 KATNAL2Q8IYT4 538 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 TTC39CQ8N584 583 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 LCMT1Q9UIC8 334 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 USTQ9Y2C2 406 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 FAN1Q9Y2M0 1017 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 SCN10AQ9Y5Y9 1956 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 COILP38432 576 aaPredicted RBP22.16■■□□□ 1.14
RITA1-201ENST00000548278 HSPA9P38646 679 aaKnown RBP22.16■■□□□ 1.14
RITA1-201ENST00000548278 LLGL1Q15334 1064 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 MFSD14CQ5VZR4 134 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 DCUN1D2Q6PH85 259 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 CCDC137Q6PK04 289 aaKnown RBP22.16■■□□□ 1.14
RITA1-201ENST00000548278 RIN2Q8WYP3 895 aaPredicted RBP22.16■■□□□ 1.14
RITA1-201ENST00000548278 C18orf25Q96B23 403 aaPredicted RBP22.16■■□□□ 1.14
RITA1-201ENST00000548278 HERPUD2Q9BSE4 406 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 DPH5Q9H2P9 285 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 LRRC19Q9H756 370 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 TJP2Q9UDY2 1190 aa22.16■■□□□ 1.14
RITA1-201ENST00000548278 HMGCRP04035 888 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 AKAP5P24588 427 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 GNASQ5JWF2 1037 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 GLRA4Q5JXX5 417 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 BEST2Q8NFU1 509 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 HEXIM2Q96MH2 286 aaKnown RBP22.15■■□□□ 1.14
RITA1-201ENST00000548278 CPXM1Q96SM3 734 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 MTG1Q9BT17 334 aaPredicted RBP22.15■■□□□ 1.14
RITA1-201ENST00000548278 FNTAP49354 379 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 DRG2P55039 364 aaKnown RBP22.15■■□□□ 1.14
RITA1-201ENST00000548278 FAM193AP78312 1265 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 TAF2Q6P1X5 1199 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 IQCKQ8N0W5 287 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 LRRC52Q8N7C0 313 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 RUNDC3BQ96NL0 473 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 APOL6Q9BWW8 343 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 TRIM31Q9BZY9 425 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 UPF3AQ9H1J1 476 aaKnown RBP22.15■■□□□ 1.14
RITA1-201ENST00000548278 VPS18Q9P253 973 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 RASAL2Q9UJF2 1139 aa22.15■■□□□ 1.14
RITA1-201ENST00000548278 HSF2BPO75031 334 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 FLT3LGP49771 235 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 GYS2P54840 703 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 GSCP56915 257 aaPredicted RBP22.14■■□□□ 1.13
RITA1-201ENST00000548278 SGO2Q562F6 1265 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 NIPA2Q8N8Q9 360 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 EXD1Q8NHP7 514 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 PIK3R5Q8WYR1 880 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 HHIPL1Q96JK4 782 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 NT5C1AQ9BXI3 368 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 KIAA1257Q9ULG3 409 aa22.14■■□□□ 1.13
RITA1-201ENST00000548278 SIGLEC16A6NMB1 481 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 F8VP50 259 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 PODXLO00592 558 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 RNF40O75150 1001 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 TCF4P15884 667 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 GPD2P43304 727 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 PIGHQ14442 188 aaPredicted RBP22.13■■□□□ 1.13
RITA1-201ENST00000548278 XKR4Q5GH76 650 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 C9orf57Q5W0N0 161 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 MAIP1Q8WWC4 291 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 SH3GL2Q99962 352 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 RNF39Q9H2S5 420 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 RNF19AQ9NV58 838 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 M0QYV0 167 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 PGK1P00558 417 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 ERBB2P04626 1255 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 CYP3A5P20815 502 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 SSR1P43307 286 aaKnown RBP22.13■■□□□ 1.13
RITA1-201ENST00000548278 PSMC1P62191 440 aaKnown RBP22.13■■□□□ 1.13
RITA1-201ENST00000548278 KLF1Q13351 362 aaPredicted RBP22.13■■□□□ 1.13
RITA1-201ENST00000548278 CXCL17Q6UXB2 119 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 XYLT1Q86Y38 959 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 C1orf54Q8WWF1 131 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 MRPL45Q9BRJ2 306 aaKnown RBP22.13■■□□□ 1.13
RITA1-201ENST00000548278 ZDHHC18Q9NUE0 388 aa22.13■■□□□ 1.13
RITA1-201ENST00000548278 UBQLN1Q9UMX0 589 aaKnown RBP22.13■■□□□ 1.13
RITA1-201ENST00000548278 SNX9Q9Y5X1 595 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms