RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PIN4Q9Y237 131 aaKnown RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 STYXL1Q9Y6J8 313 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 CD48P09326 243 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 ATF2P15336 505 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 ADORA2BP29275 332 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 ZNF157P51786 506 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 POU5F1Q01860 360 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 KCNV1Q6PIU1 500 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 PLPPR4Q7Z2D5 763 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 ZC3H18Q86VM9 953 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 CD101Q93033 1021 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 NMRK2Q9NPI5 230 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 CYTH4Q9UIA0 394 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 RGS16O15492 202 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 PTGIRP43119 386 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 MCL1Q07820 350 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 TAF1CQ15572 869 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 WDTC1Q8N5D0 677 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 PIWIL1Q96J94 861 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 TINF2Q9BSI4 451 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 GAS8O95995 478 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 CETN2P41208 172 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 NDST1P52848 882 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 PPP6R3Q5H9R7 873 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 NXF3Q9H4D5 531 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 PDZD7Q9H5P4 517 aa13.45□□□□□ -0.26
SCAF11-209ENST00000547018 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
SCAF11-209ENST00000547018 POC1B-GALNT4F8VUJ3 575 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 CES2O00748 559 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 CYP2C9P11712 490 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 ASPAP45381 313 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 P3H1Q32P28 736 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 ZDHHC24Q6UX98 284 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 SCUBE3Q8IX30 993 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 ELOVL4Q9GZR5 314 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 FZD8Q9H461 694 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 GRHL1Q9NZI5 618 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 PAPPA2Q9BXP8 1791 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 GPS1Q13098 491 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 DYDC1Q8WWB3 177 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 NDRG1Q92597 394 aaKnown RBP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 XYLT2Q9H1B5 865 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 TUBGCP4Q9UGJ1 667 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 CITO14578 2027 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 FAM189A1O60320 539 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 C6orf222P0C671 652 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 RARBP10826 455 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 CREB1P16220 341 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 MMP8P22894 467 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 GTF2A2P52657 109 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 PLEKHH3Q7Z736 793 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 ANKMY2Q8IV38 441 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
SCAF11-209ENST00000547018 TSPYL1Q9H0U9 437 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
SCAF11-209ENST00000547018 MYO18AQ92614 2054 aaKnown RBP13.43□□□□□ -0.26
SCAF11-209ENST00000547018 LGR5O75473 907 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 GCLCP48506 637 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-209ENST00000547018 MMRN1Q13201 1228 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 LDLRAD1Q5T700 205 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 RFX6Q8HWS3 928 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 KCTD6Q8NC69 237 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 C16orf70Q9BSU1 422 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 GGT7Q9UJ14 662 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 DIS3Q9Y2L1 958 aaKnown RBP13.43□□□□□ -0.26
SCAF11-209ENST00000547018 HEY1Q9Y5J3 304 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 TIMM13Q9Y5L4 95 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-209ENST00000547018 TREHO43280 583 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 PPFIA4O75335 1185 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 PIGRP01833 764 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 LSP1P33241 339 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 ARSEP51690 589 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 PTPN11Q06124 597 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-209ENST00000547018 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
SCAF11-209ENST00000547018 SH3GL2Q99962 352 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 ZDHHC18Q9NUE0 388 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
SCAF11-209ENST00000547018 EBAG9O00559 213 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 PODXLO00592 558 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 CST8O60676 142 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 LIG3P49916 1009 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ZNF252P-AS1Q0IIN9 211 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms