RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RPGRIP1Q96KN7 1286 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 SUSD3Q96L08 255 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CLSTN3Q9BQT9 956 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 FAM213AQ9BRX8 229 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 KIAA1586Q9HCI6 787 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 MTRRQ9UBK8 725 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 TUBGCP4Q9UGJ1 667 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 HPSEQ9Y251 543 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 C2CD2Q9Y426 696 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 NR2E1Q9Y466 385 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 BACE2Q9Y5Z0 518 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 DNMT3AQ9Y6K1 912 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 UBE4BO95155 1302 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 FAM237AA0A1B0GTK4 181 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CCDC195A0A1B0GUA6 201 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 LOC730098B7Z3J9 87 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 I3L4J1 428 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 SPINT1O43278 529 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 KIF20AO95235 890 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 SPATA31D3P0C874 917 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 ALADP13716 330 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CASP1P29466 404 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 OR1D2P34982 312 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 NDUFA8P51970 172 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 EHHADHQ08426 723 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 RAB33AQ14088 237 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 SURF1Q15526 300 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 LIN9Q5TKA1 542 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 KANK3Q6NY19 840 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 LILRA6Q6PI73 481 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CRELD2Q6UXH1 353 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-224ENST00000544990 TMC5Q6UXY8 1006 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 DSTYKQ6XUX3 929 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CAPN12Q6ZSI9 719 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 SPATA31D4Q6ZUB0 917 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 EPM2AIP1Q7L775 607 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-224ENST00000544990 HS2ST1Q7LGA3 356 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 USP37Q86T82 979 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 FSIP1Q8NA03 581 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 KREMEN2Q8NCW0 462 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 HPS3Q969F9 1004 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 SAAL1Q96ER3 474 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CBWD1Q9BRT8 395 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 OXCT2Q9BYC2 517 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-224ENST00000544990 FGFBP2Q9BYJ0 223 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 IKZF4Q9H2S9 585 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 PCIF1Q9H4Z3 704 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 POMKQ9H5K3 350 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 PIDD1Q9HB75 910 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 SLC39A2Q9NP94 309 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 EXOC1Q9NV70 894 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 ZDHHC7Q9NXF8 308 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 RBAKQ9NYW8 714 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CGNQ9P2M7 1197 aaKnown RBP7.97□□□□□ -1.13
CPSF7-224ENST00000544990 HCN4Q9Y3Q4 1203 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 R3HCC1Q9Y3T6 440 aaKnown RBP7.97□□□□□ -1.13
CPSF7-224ENST00000544990 CDY1Q9Y6F8 540 aa7.97□□□□□ -1.13
CPSF7-224ENST00000544990 GOLGA8IPA6NC78 632 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ZNF233A6NK53 670 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 GOLGA8JA6NMD2 632 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 PI4K2BG5E9Z4 385 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 M0QZQ0 153 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 PIRO00625 290 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ZNF202O95125 648 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 NFICP08651 508 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 HNRNPA1P09651 372 aaKnown RBP eCLIP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 WEE2P0C1S8 567 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 IGFBP6P24592 240 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ELF1P32519 619 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 TAF6P49848 677 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 LILRA4P59901 499 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 TFAMQ00059 246 aaKnown RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 YWHAHQ04917 246 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 MRPL58Q14197 206 aaKnown RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 KNOP1Q1ED39 458 aaKnown RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 CTXN3Q4LDR2 81 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 PKDCCQ504Y2 493 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 PPM1LQ5SGD2 360 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 C9orf57Q5W0N0 161 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ZNF280DQ6N043 979 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ALKBH2Q6NS38 261 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 KRBA2Q6ZNG9 492 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 CCDC149Q6ZUS6 474 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 BRSK2Q8IWQ3 736 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 NELFCDQ8IXH7 590 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 GRAMD1CQ8IYS0 662 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 GLIS3Q8NEA6 775 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ZNF461Q8TAF7 563 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 GOLGA5Q8TBA6 731 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 SCFD1Q8WVM8 642 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 SMG7Q92540 1137 aaKnown RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-224ENST00000544990 C1QTNF1Q9BXJ1 281 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 RHOBTB2Q9BYZ6 727 aa7.96□□□□□ -1.14
CPSF7-224ENST00000544990 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms