RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 NIF3L1Q9GZT8 377 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 SFXN1Q9H9B4 322 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 TMLHEQ9NVH6 421 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
CD9-210ENST00000543916 AFF4Q9UHB7 1163 aaKnown RBP16.15■□□□□ 0.18
CD9-210ENST00000543916 CDH22Q9UJ99 828 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 MTMR11A4FU01 709 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 GRXCR2A6NFK2 248 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 P4HA2O15460 535 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 ATP2C2O75185 946 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 C8AP07357 584 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 PDGFRBP09619 1106 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 WEE2P0C1S8 567 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 FAM163BP0C2L3 166 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 P4HA1P13674 534 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 GNL1P36915 607 aaPredicted RBP16.14■□□□□ 0.17
CD9-210ENST00000543916 KCNQ1P51787 676 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 PSMC1P62191 440 aaKnown RBP16.14■□□□□ 0.17
CD9-210ENST00000543916 ADCY1Q08828 1119 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 MAN2A1Q16706 1144 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 INTS6LQ5JSJ4 861 aaKnown RBP16.14■□□□□ 0.17
CD9-210ENST00000543916 MIIPQ5JXC2 388 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 LIN9Q5TKA1 542 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 TTC9BQ8N6N2 239 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 CCDC150Q8NCX0 1101 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 OR6B3Q8NGW1 331 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 LMO3Q8TAP4 145 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 TATDN2Q93075 761 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 SYT15Q9BQS2 421 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 TUBGCP2Q9BSJ2 902 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 NAT10Q9H0A0 1025 aaKnown RBP16.14■□□□□ 0.17
CD9-210ENST00000543916 HSD3B7Q9H2F3 369 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 CRISPLD1Q9H336 500 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 SNX25Q9H3E2 840 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 DPP7Q9UHL4 492 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 BRWD1Q9NSI6 2320 aa16.14■□□□□ 0.17
CD9-210ENST00000543916 PTPRDP23468 1912 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 MBTPS2O43462 519 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 ZMYND10O75800 440 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
CD9-210ENST00000543916 PCSK1P29120 753 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 TSPY1Q01534 308 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 LRMPQ12912 555 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 WDR44Q5JSH3 913 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 ELMSAN1Q6PJG2 1045 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 TMC5Q6UXY8 1006 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.13■□□□□ 0.17
CD9-210ENST00000543916 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
CD9-210ENST00000543916 TCEAL8Q8IYN2 117 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 DCP1BQ8IZD4 617 aaKnown RBP16.13■□□□□ 0.17
CD9-210ENST00000543916 ATAD1Q8NBU5 361 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 ATXN2LQ8WWM7 1075 aaKnown RBP16.13■□□□□ 0.17
CD9-210ENST00000543916 ZNF707Q96C28 371 aaPredicted RBP16.13■□□□□ 0.17
CD9-210ENST00000543916 ARID3AQ99856 593 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 LPIN3Q9BQK8 851 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 DPEP3Q9H4B8 488 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 CYP4F11Q9HBI6 524 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 CRTAC1Q9NQ79 661 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 HMGXB4Q9UGU5 601 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 GTF3C4Q9UKN8 822 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 CDH9Q9ULB4 789 aa16.13■□□□□ 0.17
CD9-210ENST00000543916 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
CD9-210ENST00000543916 UNC80Q8N2C7 3258 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 CCDC195A0A1B0GUA6 201 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 MYBPHLA2RUH7 354 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 A8MXQ7 604 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 PRRG1O14668 218 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 PAPLNO95428 1278 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 PRKCSHP14314 528 aaPredicted RBP16.12■□□□□ 0.17
CD9-210ENST00000543916 ELF1P32519 619 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 ZNF165P49910 485 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 MRPS5P82675 430 aaKnown RBP16.12■□□□□ 0.17
CD9-210ENST00000543916 DUSP4Q13115 394 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 SMAD4Q13485 552 aaKnown RBP16.12■□□□□ 0.17
CD9-210ENST00000543916 VWA3BQ502W6 1294 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 PPM1LQ5SGD2 360 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 PTCRAQ6ISU1 281 aaPredicted RBP16.12■□□□□ 0.17
CD9-210ENST00000543916 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 CMASQ8NFW8 434 aaPredicted RBP16.12■□□□□ 0.17
CD9-210ENST00000543916 INTS2Q9H0H0 1204 aaKnown RBP16.12■□□□□ 0.17
CD9-210ENST00000543916 ADAM7Q9H2U9 754 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 NDST4Q9H3R1 872 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 ZDHHC7Q9NXF8 308 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 GCNT4Q9P109 453 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 INSL5Q9Y5Q6 135 aa16.12■□□□□ 0.17
CD9-210ENST00000543916 SOAT2O75908 522 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 ZNF18P17022 549 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 CD58P19256 250 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 HOXA9P31269 272 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 NDST1P52848 882 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 ITIH3Q06033 890 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 CETN1Q12798 172 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 ORC1Q13415 861 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 IQCB1Q15051 598 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms