RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SVIL	O95425	2214 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	MED13L	Q71F56	2210 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	DENND4C	Q5VZ89	1909 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	ARL5C	A6NH57	179 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	TTLL13P	A6NNM8	815 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	RIOK3	O14730	519 aa	Known RBP	7.03	□□□□□ -1.28
CIT-213	ENST00000543324	B4GALT5	O43286	388 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	SUV39H1	O43463	412 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	DKK1	O94907	266 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	C1R	P00736	705 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	SRGAP2C	P0DJJ0	459 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	HLA-E	P13747	358 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	TXK	P42681	527 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	UBE2H	P62256	183 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	GUCY1B3	Q02153	619 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	TRIM29	Q14134	588 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	TFDP1	Q14186	410 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	IL17A	Q16552	155 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	TTC38	Q5R3I4	469 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	ZC3H18	Q86VM9	953 aa	Known RBP	7.03	□□□□□ -1.28
CIT-213	ENST00000543324	GPR65	Q8IYL9	337 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	RNF169	Q8NCN4	708 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	RNF214	Q8ND24	703 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	MCPH1	Q8NEM0	835 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	KCNN1	Q92952	543 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	NUSAP1	Q9BXS6	441 aa	Known RBP	7.03	□□□□□ -1.28
CIT-213	ENST00000543324	PRKD2	Q9BZL6	878 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	POLR3F	Q9H1D9	316 aa	Predicted RBP	7.03	□□□□□ -1.28
CIT-213	ENST00000543324	NXF3	Q9H4D5	531 aa	Known RBP	7.03	□□□□□ -1.28
CIT-213	ENST00000543324	UBN1	Q9NPG3	1134 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	GPRC5C	Q9NQ84	441 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	TRPV5	Q9NQA5	729 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	CHST7	Q9NS84	486 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	MIOS	Q9NXC5	875 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	ZDHHC7	Q9NXF8	308 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	KANSL3	Q9P2N6	904 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	GIT1	Q9Y2X7	761 aa		7.03	□□□□□ -1.28
CIT-213	ENST00000543324	OBSL1	O75147	1896 aa		7.02	□□□□□ -1.28
CIT-213	ENST00000543324	PCDH15	Q96QU1	1955 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	FBN1	P35555	2871 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324		F8W810	466 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PTGES	O14684	152 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	NRP1	O14786	923 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	SH3BP5	O60239	455 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	USO1	O60763	962 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	OPHN1	O60890	802 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	ERLIN2	O94905	339 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	GLUD1	P00367	558 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	SOD2	P04179	222 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	MYB	P10242	640 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PDIA4	P13667	645 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	CYP11B2	P19099	503 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	CCNE1	P24864	410 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	MLH1	P40692	756 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PRPH	P41219	470 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	NAMPT	P43490	491 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	FOSB	P53539	338 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PDE4C	Q08493	712 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	MAPK7	Q13164	816 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PDIA5	Q14554	519 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	SAFB	Q15424	915 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	MAPK6	Q16659	721 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	LONRF3	Q496Y0	759 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	DGKK	Q5KSL6	1271 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	HYI	Q5T013	277 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	SLC27A1	Q6PCB7	646 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	SPACA3	Q8IXA5	215 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	DAW1	Q8N136	415 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	GALNT15	Q8N3T1	639 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	URGCP	Q8TCY9	931 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	IPO4	Q8TEX9	1081 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	HDAC7	Q8WUI4	952 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	NXPE2	Q96DL1	559 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	CPB2	Q96IY4	423 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	ZFP42	Q96MM3	310 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	NACC1	Q96RE7	527 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	MMTAG2	Q9BU76	263 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	HERC2P3	Q9BVR0	1158 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	REPIN1	Q9BWE0	567 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	KCNF1	Q9H3M0	494 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PDZD7	Q9H5P4	517 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	RXFP1	Q9HBX9	757 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.02	□□□□□ -1.29
CIT-213	ENST00000543324	METRN	Q9UJH8	293 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	INPP5F	Q9Y2H2	1132 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	HES2	Q9Y543	173 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PCDHB9	Q9Y5E1	797 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	PCDHB6	Q9Y5E3	794 aa		7.02	□□□□□ -1.29
CIT-213	ENST00000543324	FN1	P02751	2386 aa	Known RBP	7.01	□□□□□ -1.29
CIT-213	ENST00000543324	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.01	□□□□□ -1.29
CIT-213	ENST00000543324		A0A087WWV3	80 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	INO80B-WBP1	J3KQ70	363 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	LAD1	O00515	517 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	ABLIM1	O14639	778 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	ITGB2	P05107	769 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	SLFN14	P0C7P3	912 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	C7	P10643	843 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	ITGA4	P13612	1032 aa		7.01	□□□□□ -1.29
CIT-213	ENST00000543324	VASP	P50552	380 aa	Predicted RBP	7.01	□□□□□ -1.29
CIT-213	ENST00000543324	SCNN1G	P51170	649 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms