RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 C11orf74Q86VG3 221 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 UPF1Q92900 1129 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDH4-201ENST00000543233 SLC7A6OSQ96CW6 309 aaPredicted RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 GBA3Q9H227 469 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 RETREG1Q9H6L5 497 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 GCNT4Q9P109 453 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CHKBQ9Y259 395 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 NFIBO00712 420 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 GYG2O15488 501 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 MYCLP12524 364 aaPredicted RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 MZF1P28698 734 aaPredicted RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 ARHGAP44Q17R89 818 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 TAF1BQ53T94 588 aaPredicted RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 HYIQ5T013 277 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 ZBED8Q8IZ13 594 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 DDHD1Q8NEL9 900 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CFAP61Q8NHU2 1237 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 FAM20AQ96MK3 541 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CEP63Q96MT8 703 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 ZFP69BQ9UJL9 534 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 AJAP1Q9UKB5 411 aaPredicted RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 NOC2LQ9Y3T9 749 aaKnown RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 WDR91A4D1P6 747 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 PGRMC1O00264 195 aaKnown RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 ZNF862O60290 1169 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 PTPN4P29074 926 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 PRKCIP41743 596 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 TNIP1Q15025 636 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 GPR162Q16538 588 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 LONRF1Q17RB8 773 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 HSP90AA5PQ58FG0 334 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 NEPROQ6NW34 567 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 OTOP1Q7RTM1 612 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 IL31RAQ8NI17 732 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CRYGNQ8WXF5 182 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 NKIRAS1Q9NYS0 192 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 ZNF212Q9UDV6 495 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 HEMK1Q9Y5R4 338 aaPredicted RBP11.86□□□□□ -0.51
CDH4-201ENST00000543233 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 DDX3XO00571 662 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH4-201ENST00000543233 SERPING1P05155 500 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 UCHL3P15374 230 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 EIF2AK2P19525 551 aaKnown RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 CEP55Q53EZ4 464 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 FAM209AQ5JX71 171 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH4-201ENST00000543233 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 COQ6Q9Y2Z9 468 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 TMX2Q9Y320 296 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 SNX24Q9Y343 169 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 ADCY6O43306 1168 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 CALUO43852 315 aaPredicted RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 LRRN2O75325 713 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 DCTN3O75935 186 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 ZBED1O96006 694 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 OCM2P0CE71 109 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 OCMP0CE72 109 aaPredicted RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 CYP2C9P11712 490 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 ABCB4P21439 1286 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 ATP1A4Q13733 1029 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 UBAP2Q5T6F2 1119 aaKnown RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 LXNQ9BS40 222 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 MKNK1Q9BUB5 465 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 PARVBQ9HBI1 364 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 METTL14Q9HCE5 456 aaKnown RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 NDUFA13Q9P0J0 144 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 STX18Q9P2W9 335 aaKnown RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 GIT1Q9Y2X7 761 aa11.85□□□□□ -0.51
CDH4-201ENST00000543233 COL11A2P13942 1736 aaPredicted RBP11.85□□□□□ -0.51
CDH4-201ENST00000543233 ASTN1O14525 1302 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 GOLGA8TH3BQL2 631 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 EXOC3O60645 756 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 ALDH2P05091 517 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 HNRNPH3P31942 346 aaKnown RBP11.84□□□□□ -0.51
CDH4-201ENST00000543233 GTF2H1P32780 548 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 MSLNQ13421 630 aaPredicted RBP11.84□□□□□ -0.51
CDH4-201ENST00000543233 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
CDH4-201ENST00000543233 RNF169Q8NCN4 708 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 CCDC110Q8TBZ0 833 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 CHURC1Q8WUH1 139 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 FAM151AQ8WW52 585 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 STARD8Q92502 1023 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 KLHL4Q9C0H6 718 aa11.84□□□□□ -0.51
CDH4-201ENST00000543233 TBK1Q9UHD2 729 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms