RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 HASPINQ8TF76 798 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 C17orf80Q9BSJ5 609 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 AAASQ9NRG9 546 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 CISHQ9NSE2 258 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 PAXBP1Q9Y5B6 917 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 PDCD11Q14690 1871 aaKnown RBP29.62■■■□□ 2.33
CCM2-218ENST00000541586 TRIOBPQ9H2D6 2365 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 MACROD2A1Z1Q3 448 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 F8W810 466 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 STAU1O95793 577 aaKnown RBP29.62■■■□□ 2.33
CCM2-218ENST00000541586 LAG3P18627 525 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 CD58P19256 250 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 FMO1Q01740 532 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 UPP1Q16831 310 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 COLGALT1Q8NBJ5 622 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 CLP1Q92989 425 aaKnown RBP29.62■■■□□ 2.33
CCM2-218ENST00000541586 TIFAQ96CG3 184 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 ZNF558Q96NG5 402 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 BCO2Q9BYV7 579 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 PCDHB12Q9Y5F1 795 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 PODXLO00592 558 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 B3GAT3O94766 335 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 IGFBP6P24592 240 aaPredicted RBP29.61■■■□□ 2.33
CCM2-218ENST00000541586 ZNF132P52740 706 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 TAP1Q03518 808 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 PCDHB18PQ96TA0 734 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 TMEM175Q9BSA9 504 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 TAS2R14Q9NYV8 317 aa29.61■■■□□ 2.33
CCM2-218ENST00000541586 TMCO5BA8MYB1 307 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 PPEF2O14830 753 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 RPL9P32969 192 aaKnown RBP29.6■■■□□ 2.33
CCM2-218ENST00000541586 CTNNB1P35222 781 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 C9orf57Q5W0N0 161 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 SLC35F6Q8N357 371 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 SECISBP2LQ93073 1101 aaKnown RBP29.6■■■□□ 2.33
CCM2-218ENST00000541586 DDX27Q96GQ7 796 aaKnown RBP29.6■■■□□ 2.33
CCM2-218ENST00000541586 UROC1Q96N76 676 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 SALL4Q9UJQ4 1053 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 ATP8B3O60423 1300 aa29.6■■■□□ 2.33
CCM2-218ENST00000541586 H2AFZP0C0S5 128 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 LINC00271P0C7V0 271 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 CASQ1P31415 396 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 H2AFVQ71UI9 128 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 COLEC11Q9BWP8 271 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 TADA2AO75478 443 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 P4HA1P13674 534 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 LRPAP1P30533 357 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 BMPR1AP36894 532 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 RAP1GAPP47736 663 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 YWHAEP62258 255 aaKnown RBP29.59■■■□□ 2.33
CCM2-218ENST00000541586 MYO1EQ12965 1108 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 SMYD5Q6GMV2 418 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 TMEM173Q86WV6 379 aaPredicted RBP29.59■■■□□ 2.33
CCM2-218ENST00000541586 ZNF677Q86XU0 584 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 TGS1Q96RS0 853 aaKnown RBP29.59■■■□□ 2.33
CCM2-218ENST00000541586 SMYD3Q9H7B4 428 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 INTUQ9ULD6 942 aa29.59■■■□□ 2.33
CCM2-218ENST00000541586 DCLRE1AQ6PJP8 1040 aa29.58■■■□□ 2.33
CCM2-218ENST00000541586 C3orf58Q8NDZ4 430 aa29.58■■■□□ 2.33
CCM2-218ENST00000541586 SDCBP2Q9H190 292 aa29.58■■■□□ 2.33
CCM2-218ENST00000541586 CDH23Q9H251 3354 aa29.58■■■□□ 2.33
CCM2-218ENST00000541586 ANO9A1A5B4 782 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 KIF4AO95239 1232 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 ITGB1P05556 798 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 GNA15P30679 374 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 GALCP54803 685 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 CDH8P55286 799 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 LRRC52Q8N7C0 313 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.57■■■□□ 2.32
CCM2-218ENST00000541586 PIRO00625 290 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 KLHL23Q8NBE8 558 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 ARNTL2Q8WYA1 636 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 ISCUQ9H1K1 167 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 CYP3A43Q9HB55 503 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 SPG21Q9NZD8 308 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 RWDD3Q9Y3V2 267 aa29.57■■■□□ 2.32
CCM2-218ENST00000541586 FAM170AA1A519 330 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 BTNL10A8MVZ5 291 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 MOCS3O95396 460 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 GZMAP12544 262 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 TNNC1P63316 161 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 ZNF394Q53GI3 561 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 RNF10Q8N5U6 811 aaKnown RBP29.56■■■□□ 2.32
CCM2-218ENST00000541586 IGSF21Q96ID5 467 aa29.56■■■□□ 2.32
CCM2-218ENST00000541586 SLC39A11Q8N1S5 342 aa29.55■■■□□ 2.32
CCM2-218ENST00000541586 BCL7CQ8WUZ0 217 aaPredicted RBP29.55■■■□□ 2.32
CCM2-218ENST00000541586 TMEM169Q96HH4 297 aa29.55■■■□□ 2.32
CCM2-218ENST00000541586 MARCH5Q9NX47 278 aa29.55■■■□□ 2.32
CCM2-218ENST00000541586 ADAM28Q9UKQ2 775 aa29.55■■■□□ 2.32
CCM2-218ENST00000541586 CAPN6Q9Y6Q1 641 aa29.55■■■□□ 2.32
CCM2-218ENST00000541586 SCN1AP35498 2009 aa29.55■■■□□ 2.32
CCM2-218ENST00000541586 SOX1O00570 391 aaPredicted RBP29.54■■■□□ 2.32
CCM2-218ENST00000541586 BUB1O43683 1085 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 RTN2O75298 545 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 FTLP02792 175 aaPredicted RBP29.54■■■□□ 2.32
CCM2-218ENST00000541586 BRCC3P46736 316 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 ERVK-21P61565 698 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 I3L4J1 428 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 THAP12O43422 761 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 FGF18O76093 207 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms