RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 ICMTO60725 284 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 HSPA4LO95757 839 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TFAP4Q01664 338 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 PTK2Q05397 1052 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CHRNDQ07001 517 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MAP2K5Q13163 448 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 SNW1Q13573 536 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 AARS2Q5JTZ9 985 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 CNNM4Q6P4Q7 775 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 C6orf89Q6UWU4 347 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TPTE2Q6XPS3 522 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 ANO5Q75V66 913 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 ADCK1Q86TW2 530 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 VPS37DQ86XT2 251 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 ANKS4BQ8N8V4 417 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 NECAB1Q8N987 351 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CNBD1Q8NA66 436 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MTMR14Q8NCE2 650 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 PIK3C3Q8NEB9 887 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 LRGUKQ96M69 825 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CENPKQ9BS16 269 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TRIM15Q9C019 465 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 FTOQ9C0B1 505 aaKnown RBP eCLIP6.49□□□□□ -1.37
LMO3-225ENST00000541295 KANSL2Q9H9L4 492 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 FANCEQ9HB96 536 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 LRRC4BQ9NT99 713 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 INTS10Q9NVR2 710 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 KBTBD4Q9NVX7 518 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 REV1Q9UBZ9 1251 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MAST3O60307 1309 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MED23Q9ULK4 1368 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 EP400Q96L91 3159 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 A0A0G2JLW4 131 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CTAGE15A4D2H0 777 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 SPOPO43791 374 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 STX10O60499 249 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 DNAJB5O75953 348 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 USP1O94782 785 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 ZBED1O96006 694 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 ITGA2BP08514 1039 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CTAGE8P0CG41 777 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CAPN3P20807 821 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 BCAMP50895 628 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 FXR1P51114 621 aaKnown RBP eCLIP6.49□□□□□ -1.37
LMO3-225ENST00000541295 HSD17B4P51659 736 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 CARD18P57730 90 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 COG7P83436 770 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CACNB1Q02641 598 aaPredicted RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 DNM1Q05193 864 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 ENPEPQ07075 957 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 NCAPHQ15003 741 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TLR1Q15399 786 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 HADHQ16836 314 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 SH3D19Q5HYK7 790 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MAP3K21Q5TCX8 1036 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 ATL3Q6DD88 541 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 PHLDB3Q6NSJ2 640 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TRIM65Q6PJ69 517 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 OTOP3Q7RTS5 596 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TBC1D1Q86TI0 1168 aaPredicted RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 CTAGE6Q86UF2 777 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 HID1Q8IV36 788 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 PASD1Q8IV76 773 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.49□□□□□ -1.37
LMO3-225ENST00000541295 CTAGE4Q8IX94 777 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 REXO1Q8N1G1 1221 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 TTLQ8NG68 377 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 P3H4Q92791 437 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MAP4K1Q92918 833 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TUBGCP3Q96CW5 907 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 CEP170P1Q96L14 293 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 VPS35Q96QK1 796 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 SDF4Q9BRK5 362 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 LIN28AQ9H9Z2 209 aaKnown RBP6.49□□□□□ -1.37
LMO3-225ENST00000541295 CTNNAL1Q9UBT7 734 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 LNPEPQ9UIQ6 1025 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 RABGEF1Q9UJ41 708 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 TLL2Q9Y6L7 1015 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MROH5Q6ZUA9 1318 aa6.49□□□□□ -1.37
LMO3-225ENST00000541295 MYH3P11055 1940 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 ATRNO75882 1429 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 CCDC78A2IDD5 438 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 WTIPA6NIX2 430 aaPredicted RBP6.48□□□□□ -1.37
LMO3-225ENST00000541295 A8MX80 341 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 PSMD11O00231 422 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 ARHGAP33O14559 1287 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 MAP2K7O14733 419 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 PRPF3O43395 683 aaKnown RBP6.48□□□□□ -1.37
LMO3-225ENST00000541295 AKAP10O43572 662 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 CLUP10909 449 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 ITGAXP20702 1163 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 CLCN4P51793 760 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 COPB1P53618 953 aaKnown RBP6.48□□□□□ -1.37
LMO3-225ENST00000541295 MCL1Q07820 350 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 NECTIN1Q15223 517 aa6.48□□□□□ -1.37
LMO3-225ENST00000541295 EZH2Q15910 746 aaKnown RBP6.48□□□□□ -1.37
LMO3-225ENST00000541295 LRIT3Q3SXY7 679 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms