RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ERBB2P04626 1255 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 PFKMP08237 780 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 MYBL1P10243 752 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 SLC7A5Q01650 507 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 ITIH3Q06033 890 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 MYO1EQ12965 1108 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 FAM26DQ5JW98 314 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 ACOT1Q86TX2 421 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 OSTM1Q86WC4 334 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 ACTRT1Q8TDG2 376 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 CPXM1Q96SM3 734 aa13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 TULP2O00295 520 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 MYBL2P10244 700 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 P4HA1P13674 534 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 TCF4P15884 667 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 LMO2P25791 158 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 CDR1P51861 262 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 TAS2R40P59535 323 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 MTFR1Q15390 333 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 PPP1R15BQ5SWA1 713 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 LIN9Q5TKA1 542 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 ADAT2Q7Z6V5 191 aaKnown RBP13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 GSPT2Q8IYD1 628 aaKnown RBP13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 TRIM11Q96F44 468 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 PAAF1Q9BRP4 392 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 HERPUD2Q9BSE4 406 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 FAM49BQ9NUQ9 324 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 L1RE1Q9UN81 338 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 NOD1Q9Y239 953 aa13.02□□□□□ -0.33
AP003559.1-201ENST00000540906 TCRBV7S2A1N4TA0A589 114 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 M0QYV0 167 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 PIK3R2O00459 728 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 GABBR2O75899 941 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 CABYRO75952 493 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 PYGMP11217 842 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 VDRP11473 427 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 CKBP12277 381 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 CTNNA2P26232 953 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 GPD2P43304 727 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 SCNN1GP51170 649 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 PAK2Q13177 524 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 LLGL1Q15334 1064 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 PPP1R26Q5T8A7 1209 aaPredicted RBP13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 CC2D1AQ6P1N0 951 aaPredicted RBP13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 MRPL10Q7Z7H8 261 aaKnown RBP13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 JOSD2Q8TAC2 188 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 KRT12Q99456 494 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 LHX5Q9H2C1 402 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 CHST12Q9NRB3 414 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 RNF14Q9UBS8 474 aa13.01□□□□□ -0.33
AP003559.1-201ENST00000540906 ARL5CA6NH57 179 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 KPNA7A9QM74 516 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 GOLGA8SH3BPF8 625 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 PGRMC1O00264 195 aaKnown RBP13□□□□□ -0.33
AP003559.1-201ENST00000540906 GPR182O15218 404 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 SPOPO43791 374 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 PROSCO94903 275 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 ZRANB2O95218 330 aaKnown RBP eCLIP13□□□□□ -0.33
AP003559.1-201ENST00000540906 CD4P01730 458 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 FGGP02679 453 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 PDGFRBP09619 1106 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 LRPAP1P30533 357 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 CNGA2Q16280 664 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 GOLGA7BQ2TAP0 167 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 RTN4RL1Q86UN2 441 aaPredicted RBP13□□□□□ -0.33
AP003559.1-201ENST00000540906 TTC30AQ86WT1 665 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 ERICH1Q86X53 443 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 RNF169Q8NCN4 708 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 FEZF2Q8TBJ5 459 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 PIWIL1Q96J94 861 aaKnown RBP13□□□□□ -0.33
AP003559.1-201ENST00000540906 MCEEQ96PE7 176 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 ADAM2Q99965 735 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 TSEN34Q9BSV6 310 aaKnown RBP13□□□□□ -0.33
AP003559.1-201ENST00000540906 NT5C1AQ9BXI3 368 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 STARD7Q9NQZ5 370 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 TSPAN16Q9UKR8 245 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 PCDHA3Q9Y5H8 950 aa13□□□□□ -0.33
AP003559.1-201ENST00000540906 TMEM191CA6NGB0 347 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 SASH3O75995 380 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 TAF6P49848 677 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 LILRA4P59901 499 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 TRADDQ15628 312 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms