RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 MRPL45Q9BRJ2 306 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 C11orf16Q9NQ32 467 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 KIAA1468Q9P260 1216 aa19.62■□□□□ 0.73
SNRPA1-203ENST00000540017 CETN3O15182 167 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 ATP2C2O75185 946 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 KRT13P13646 458 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 PTPN2P17706 415 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 WARSP23381 471 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 ATICP31939 592 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 GCLMP48507 274 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 LHX1P48742 406 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 INTS6LQ5JSJ4 861 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 KLHL10Q6JEL2 608 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 ST13P5Q8NFI4 369 aaPredicted RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 SPATA18Q8TC71 538 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 DHTKD1Q96HY7 919 aaPredicted RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 TSG101Q99816 390 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 DUSP9Q99956 384 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 CORO1BQ9BR76 489 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 MKNK1Q9BUB5 465 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 SMOC2Q9H3U7 446 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 VRTNQ9H8Y1 702 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 EPS15L1Q9UBC2 864 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 NXF1Q9UBU9 619 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 MYO10Q9HD67 2058 aa19.61■□□□□ 0.73
SNRPA1-203ENST00000540017 PSMA7O14818 248 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 LRRN2O75325 713 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 HLA-DRAP01903 254 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 LAMP2P13473 410 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 ALADP13716 330 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 CCR2P41597 374 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 FKBP3Q00688 224 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 MYL7Q01449 175 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 TSPY1Q01534 308 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 LRRC63Q05C16 580 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 STIM1Q13586 685 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 PTPN21Q16825 1174 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 ZNF699Q32M78 642 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 TTI2Q6NXR4 508 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 DCP1BQ8IZD4 617 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 ING5Q8WYH8 240 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 TCEAL4Q96EI5 215 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 CLSTN2Q9H4D0 955 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 MMRN2Q9H8L6 949 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 ABI2Q9NYB9 513 aaPredicted RBP19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 GTF3C4Q9UKN8 822 aa19.6■□□□□ 0.73
SNRPA1-203ENST00000540017 MYBPHLA2RUH7 354 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 FAM86C2PA6NEL3 165 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 TACC1O75410 805 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 PDGFRBP09619 1106 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 HAPLN1P10915 354 aaPredicted RBP19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 EPB41P11171 864 aaKnown RBP19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 ATF6P18850 670 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 CDH8P55286 799 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 PSMC1P62191 440 aaKnown RBP19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 TNNC1P63316 161 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 ENPEPQ07075 957 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 MGAT5BQ3V5L5 792 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 PRSS36Q5K4E3 855 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 SPOPLQ6IQ16 392 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 SPPL2BQ8TCT7 592 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 TAS1R2Q8TE23 839 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 NELFBQ8WX92 580 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 RSAD2Q8WXG1 361 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 FGF13Q92913 245 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 ZNF512Q96ME7 567 aaPredicted RBP19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 SEPT5Q99719 369 aaPredicted RBP19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 LPIN3Q9BQK8 851 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 PI4K2AQ9BTU6 479 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 LRRC3Q9BY71 257 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 SDCBP2Q9H190 292 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 SMYD3Q9H7B4 428 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 CRTAC1Q9NQ79 661 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 AVENQ9NQS1 362 aaPredicted RBP19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.59■□□□□ 0.733e-8■■■■■ 45.9
SNRPA1-203ENST00000540017 HSFX1Q9UBD0 423 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 CDH7Q9ULB5 785 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 CTNND2Q9UQB3 1225 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 PCDHB5Q9Y5E4 795 aa19.59■□□□□ 0.73
SNRPA1-203ENST00000540017 MOSPD3O75425 235 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 CEBPBP17676 345 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 PCSK1P29120 753 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 RAP1GAPP47736 663 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 ALDH1A3P47895 512 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 GPR15P49685 360 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 STX17P56962 302 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 ZXDAP98168 799 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 SMARCB1Q12824 385 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 ZNF667Q5HYK9 610 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 FAM171BQ6P995 826 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 NPAS3Q8IXF0 933 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 ELMOD1Q8N336 334 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 C2orf15Q8WU43 125 aaKnown RBP19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 EDAQ92838 391 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 SYT15Q9BQS2 421 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 KCNK12Q9HB15 430 aa19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 ZNF334Q9HCZ1 680 aaPredicted RBP19.58■□□□□ 0.72
SNRPA1-203ENST00000540017 MRPS23Q9Y3D9 190 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms