RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
PRPF19-204ENST00000539960 CCDC183Q5T5S1 534 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 SLC35C1Q96A29 364 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 ELMO3Q96BJ8 720 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 COL25A1Q9BXS0 654 aaPredicted RBP14.38□□□□□ -0.11
PRPF19-204ENST00000539960 SNX25Q9H3E2 840 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 WDR6Q9NNW5 1121 aaKnown RBP14.38□□□□□ -0.11
PRPF19-204ENST00000539960 HSFX1Q9UBD0 423 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 DACH1Q9UI36 760 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 SLC27A5Q9Y2P5 690 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 INSL5Q9Y5Q6 135 aa14.38□□□□□ -0.11
PRPF19-204ENST00000539960 MTMR11A4FU01 709 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 LRG1P02750 347 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 PDGFRBP09619 1106 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 ACAT1P24752 427 aaKnown RBP14.37□□□□□ -0.11
PRPF19-204ENST00000539960 MXI1P50539 228 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 CDH8P55286 799 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 MARSP56192 900 aaKnown RBP14.37□□□□□ -0.11
PRPF19-204ENST00000539960 NFE2Q16621 373 aaPredicted RBP14.37□□□□□ -0.11
PRPF19-204ENST00000539960 INTS6LQ5JSJ4 861 aaKnown RBP14.37□□□□□ -0.11
PRPF19-204ENST00000539960 FAM171BQ6P995 826 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 GJD3Q8N144 294 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 FBXL13Q8NEE6 735 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 OR6B3Q8NGW1 331 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
PRPF19-204ENST00000539960 SEMA4DQ92854 862 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 RPGRIP1Q96KN7 1286 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 PI4K2AQ9BTU6 479 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 IMPG2Q9BZV3 1241 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 CRISPLD1Q9H336 500 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 CD320Q9NPF0 282 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 TMLHEQ9NVH6 421 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 RAB20Q9NX57 234 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 GTF3C4Q9UKN8 822 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 CDH9Q9ULB4 789 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 COQ4Q9Y3A0 265 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 PLXNA3P51805 1871 aa14.37□□□□□ -0.11
PRPF19-204ENST00000539960 MYBPHLA2RUH7 354 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 LOC730098B7Z3J9 87 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 PMM2O15305 246 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 HCRTO43612 131 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 ATP2C2O75185 946 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 LRRN2O75325 713 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CLSTN1O94985 981 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CCDC192P0DO97 292 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 PTPN2P17706 415 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 ALDH1A3P47895 512 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 TUFMP49411 452 aaKnown RBP14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CDR1P51861 262 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 TWF1Q12792 350 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CBWD6Q4V339 395 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CBWD3Q5JTY5 395 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CBWD5Q5RIA9 395 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 SPOPLQ6IQ16 392 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 GRASPQ7Z6J2 395 aaPredicted RBP14.36□□□□□ -0.11
PRPF19-204ENST00000539960 IRF2BP1Q8IU81 584 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 TRIM59Q8IWR1 403 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 CCDC150Q8NCX0 1101 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 PKMYT1Q99640 499 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 SDCBP2Q9H190 292 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 APOBEC3GQ9HC16 384 aaKnown RBP14.36□□□□□ -0.11
PRPF19-204ENST00000539960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRPF19-204ENST00000539960 TMEM63CQ9P1W3 806 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 DNMT3BQ9UBC3 853 aaKnown RBP14.36□□□□□ -0.11
PRPF19-204ENST00000539960 USTQ9Y2C2 406 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 NME7Q9Y5B8 376 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 PCDHB5Q9Y5E4 795 aa14.36□□□□□ -0.11
PRPF19-204ENST00000539960 TCF20Q9UGU0 1960 aaKnown RBP14.36□□□□□ -0.11
PRPF19-204ENST00000539960 MTCL1Q9Y4B5 1905 aaKnown RBP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 HAPLN1P10915 354 aaPredicted RBP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 SSTR3P32745 418 aaPredicted RBP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 FMO5P49326 533 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 NTHL1P78549 312 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 TPD52L1Q16890 204 aaPredicted RBP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 WDR44Q5JSH3 913 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 OTOP3Q7RTS5 596 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 TTC9BQ8N6N2 239 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 FAXDC2Q96IV6 333 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 ZNF512Q96ME7 567 aaPredicted RBP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 SYT15Q9BQS2 421 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 CYP3A43Q9HB55 503 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 HCFC1R1Q9NWW0 138 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 ABI2Q9NYB9 513 aaPredicted RBP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 CEP72Q9P209 647 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 NR2E1Q9Y466 385 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 YIPF1Q9Y548 306 aa14.35□□□□□ -0.11
PRPF19-204ENST00000539960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF19-204ENST00000539960 SPTBN5Q9NRC6 3674 aaKnown RBP14.34□□□□□ -0.11
PRPF19-204ENST00000539960 TTC28Q96AY4 2481 aa14.34□□□□□ -0.11
PRPF19-204ENST00000539960 A8MXQ7 604 aa14.34□□□□□ -0.11
PRPF19-204ENST00000539960 N4BP1O75113 896 aaKnown RBP14.34□□□□□ -0.11
PRPF19-204ENST00000539960 PTPN1P18031 435 aaKnown RBP14.34□□□□□ -0.11
PRPF19-204ENST00000539960 ASPAP45381 313 aa14.34□□□□□ -0.11
PRPF19-204ENST00000539960 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
PRPF19-204ENST00000539960 EPHB3P54753 998 aa14.34□□□□□ -0.11
PRPF19-204ENST00000539960 NOP14P78316 857 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms