RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ACBD6Q9BR61 282 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 APOL5Q9BWW9 433 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 BCO2Q9BYV7 579 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 NIF3L1Q9GZT8 377 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 HSD3B7Q9H2F3 369 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 CBX8Q9HC52 389 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 TMLHEQ9NVH6 421 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 COG5Q9UP83 839 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 A0A0C4DFX4 3053 aa13.6□□□□□ -0.23
TSPAN9-207ENST00000539631 PTPRDP23468 1912 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 ATP2C2O75185 946 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 SEC24AO95486 1093 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 VNN2O95498 520 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 ATF2P15336 505 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 GNL1P36915 607 aaPredicted RBP13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 PSMC1P62191 440 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 TSPY1Q01534 308 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 TFF2Q03403 129 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 CETN1Q12798 172 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 GPR17Q13304 367 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 KRT31Q15323 416 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 CCDC142Q17RM4 750 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 INTS6LQ5JSJ4 861 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 TPGS2Q68CL5 300 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 SYT15Q9BQS2 421 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 VPS16Q9H269 839 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 NDST4Q9H3R1 872 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 DPEP3Q9H4B8 488 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 PLEKHA4Q9H4M7 779 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 DZANK1Q9NVP4 752 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 AFF4Q9UHB7 1163 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 COL6A3P12111 3177 aa13.59□□□□□ -0.23
TSPAN9-207ENST00000539631 MYBPHLA2RUH7 354 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 MTMR11A4FU01 709 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 BECN2A8MW95 431 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 A8MXQ7 604 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 RFPL2O75678 378 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 C8AP07357 584 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 ZNF18P17022 549 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CD58P19256 250 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 PCSK1P29120 753 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 ELF1P32519 619 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 ADCY1Q08828 1119 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 RARS2Q5T160 578 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 ARHGEF19Q8IW93 802 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 DCP1BQ8IZD4 617 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 SLC7A14Q8TBB6 771 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 NT5C1BQ96P26 610 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 ARID3AQ99856 593 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 LPIN3Q9BQK8 851 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CRACR2AQ9BSW2 395 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CRISPLD1Q9H336 500 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 SFXN1Q9H9B4 322 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CYP3A43Q9HB55 503 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CRTAC1Q9NQ79 661 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 GCNT4Q9P109 453 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 LIMA1Q9UHB6 759 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 DPP7Q9UHL4 492 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CD207Q9UJ71 328 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 GTF3C4Q9UKN8 822 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 CDH9Q9ULB4 789 aa13.58□□□□□ -0.24
TSPAN9-207ENST00000539631 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 PRRG1O14668 218 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 ZMYND10O75800 440 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 ATP1A3P13637 1013 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 HOXB8P17481 243 aaPredicted RBP13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 SLC9A1P19634 815 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 CDK11BP21127 795 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 NDST1P52848 882 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 DUSP4Q13115 394 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 ORC1Q13415 861 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 LEXMQ3ZCV2 418 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 PPM1LQ5SGD2 360 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 LIN9Q5TKA1 542 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 FAM171BQ6P995 826 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 TMC5Q6UXY8 1006 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 TCEAL8Q8IYN2 117 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 TTC9BQ8N6N2 239 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 ATAD1Q8NBU5 361 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 TWNKQ96RR1 684 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 S1PR5Q9H228 398 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 TSPY26PQ9H489 355 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 CDH22Q9UJ99 828 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms