RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 NMD3Q96D46 503 aaKnown RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 TNIP3Q96KP6 325 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 FOPNLQ96NB1 174 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 TMEM47Q9BQJ4 181 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 DMAP1Q9NPF5 467 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 RBAKQ9NYW8 714 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 PRDM4Q9UKN5 801 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 HPS5Q9UPZ3 1129 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 INPP5FQ9Y2H2 1132 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 STARD13Q9Y3M8 1113 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 NEO1Q92859 1461 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 DISP1Q96F81 1524 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CYP26A1O43174 497 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 TIMM44O43615 452 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CNOT3O75175 753 aaKnown RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 USP17L8P0C7I0 530 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 FCER1AP12319 257 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ATP4AP20648 1035 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 COMTP21964 271 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 RAD23AP54725 363 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ITGA1P56199 1179 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CDC42EP1Q00587 391 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 BTKQ06187 659 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 DNAJC3Q13217 504 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 FAM83EQ2M2I3 478 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 PACS2Q86VP3 889 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ABHD8Q96I13 439 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 TMEM120AQ9BXJ8 343 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 AGPAT5Q9NUQ2 364 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 IMPAD1Q9NX62 359 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CYP39A1Q9NYL5 469 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 EIF3LQ9Y262 564 aaKnown RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 ARIH1Q9Y4X5 557 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 TMEM2Q9UHN6 1383 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 MROH7Q68CQ1 1323 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 SLC16A4O15374 487 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ALOX5P09917 674 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 CASP1P29466 404 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 RECQLP46063 649 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 TPI1P60174 286 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 KCNMA1Q12791 1236 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 NAB1Q13506 487 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ITGA9Q13797 1035 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 AGAP9Q5VTM2 703 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 FAM81AQ8TBF8 368 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 SCFD2Q8WU76 684 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 S100ZQ8WXG8 99 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ZKSCAN4Q969J2 545 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 PPP1R14BQ96C90 147 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 EFCAB6Q5THR3 1501 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 USP17L3A6NCW0 530 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 USP17L4A6NCW7 530 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 UBOX5O94941 541 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 MPOP05164 745 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 MAGEA10P43363 369 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 KLHDC7AQ5VTJ3 777 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 PKN3Q6P5Z2 889 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 USP17L1Q7RTZ2 530 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 CENPLQ8N0S6 344 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 WNK4Q96J92 1243 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ZNF512BQ96KM6 892 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 ZNF184Q99676 751 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 ANKZF1Q9H8Y5 726 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 PLGRKTQ9HBL7 147 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 EXOSC4Q9NPD3 245 aaKnown RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 AGO2Q9UKV8 859 aaKnown RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 PLAGL2Q9UPG8 496 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 NRKQ7Z2Y5 1582 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 PPP1R3GB7ZBB8 358 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 FKBP9O95302 570 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 HIST1H2AGP0C0S8 130 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 IMPDH2P12268 514 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 TCF3P15923 654 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 HIST1H2ADP20671 130 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 RGS4P49798 205 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 FXR2P51116 673 aaKnown RBP eCLIP7.2□□□□□ -1.26
SORT1-209ENST00000538502 STXBP2Q15833 593 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 NAPEPLDQ6IQ20 393 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 FKBP9P1Q75LS8 142 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 NET1Q7Z628 596 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 ENGASEQ8NFI3 743 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 HIST1H2AHQ96KK5 128 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 HIST1H2AJQ99878 128 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ECSITQ9BQ95 431 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 H2AFJQ9BTM1 129 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 COA1Q9GZY4 146 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 TMEM8AQ9HCN3 771 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ZNF302Q9NR11 478 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 SOAT2O75908 522 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 IL18RAPO95256 599 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 IFNA14P01570 189 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ZCCHC18P0CG32 403 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 RRM2P31350 389 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 TALDO1P37837 337 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 PSMC6P62333 389 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 C1DQ13901 141 aaKnown RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 PROSER3Q2NL68 480 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms