RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PFKFB1P16118 471 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 NUCB2P80303 420 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
PRKDC-207ENST00000536483 PSMD2Q13200 908 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 CUL4BQ13620 913 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 MYBPC2Q14324 1141 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 TEAD2Q15562 447 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 CEP57L1Q8IYX8 460 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 GPD1LQ8N335 351 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 ZSCAN18Q8TBC5 510 aaPredicted RBP13.43□□□□□ -0.26
PRKDC-207ENST00000536483 FAM3CQ92520 227 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 SECISBP2LQ93073 1101 aaKnown RBP13.43□□□□□ -0.26
PRKDC-207ENST00000536483 PGLYRP2Q96PD5 576 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 FAM213AQ9BRX8 229 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 CHRDQ9H2X0 955 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 LMAN1LQ9HAT1 526 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 ASAH2Q9NR71 780 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 HSFX1Q9UBD0 423 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 SERTAD1Q9UHV2 236 aa13.43□□□□□ -0.26
PRKDC-207ENST00000536483 NCANO14594 1321 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 OR6C75A6NL08 312 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 PPEF2O14830 753 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 ZNF263O14978 683 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 OR4Q2P0C623 313 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 EPHA5P54756 1037 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 WNT7BP56706 349 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 GPR17Q13304 367 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 SURF1Q15526 300 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
PRKDC-207ENST00000536483 LEMD2Q8NC56 503 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 CACTINQ8WUQ7 758 aaKnown RBP13.42□□□□□ -0.26
PRKDC-207ENST00000536483 DEPDC1BQ8WUY9 529 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 SENP8Q96LD8 212 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 FAM126AQ9BYI3 521 aaPredicted RBP13.42□□□□□ -0.26
PRKDC-207ENST00000536483 TRPV5Q9NQA5 729 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 AGPAT3Q9NRZ7 376 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 RBAKQ9NYW8 714 aaPredicted RBP13.42□□□□□ -0.26
PRKDC-207ENST00000536483 DSEQ9UL01 958 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 YIPF1Q9Y548 306 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 PIAS3Q9Y6X2 628 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 SPTBN2O15020 2390 aa13.42□□□□□ -0.26
PRKDC-207ENST00000536483 ZNF233A6NK53 670 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 HEPACAM2A8MVW5 462 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 VNN2O95498 520 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 ODC1P11926 461 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 TDGF1P13385 188 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 PNPLA4P41247 253 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 TAF6P49848 677 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 MFSD6LQ8IWD5 586 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 LRRC52Q8N7C0 313 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 SHKBP1Q8TBC3 707 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 SPATA18Q8TC71 538 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 RSPRY1Q96DX4 576 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 ANP32EQ9BTT0 268 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 LRRC3Q9BY71 257 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 CRISPLD1Q9H336 500 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 TRPV4Q9HBA0 871 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 HSPBP1Q9NZL4 362 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 ITGA11Q9UKX5 1188 aa13.41□□□□□ -0.26
PRKDC-207ENST00000536483 A0A1W2PRU2 124 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 ARNTLO00327 626 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 CHRNB1P11230 501 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 TGM1P22735 817 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 CCNE1P24864 410 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 CASP1P29466 404 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 SYKP43405 635 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 AFMP43652 599 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 NDUFA8P51970 172 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 ATXN1P54253 815 aaKnown RBP13.4□□□□□ -0.26
PRKDC-207ENST00000536483 SMARCB1Q12824 385 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 STK4Q13043 487 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 DUSP4Q13115 394 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 LPAL2Q16609 132 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 KNOP1Q1ED39 458 aaKnown RBP13.4□□□□□ -0.26
PRKDC-207ENST00000536483 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 USP37Q86T82 979 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 TMC8Q8IU68 726 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 GOLGA5Q8TBA6 731 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 IER2Q9BTL4 223 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 GPR88Q9GZN0 384 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 DNAJC25Q9H1X3 360 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
PRKDC-207ENST00000536483 DMAC2Q9NW81 257 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms