RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 PRR33A8MZF0 331 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 ANHXE9PGG2 379 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 ATP2C2O75185 946 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 SMC2O95347 1197 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 TRIM49P0CI25 452 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 TRIM49CP0CI26 452 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 ATF6P18850 670 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 BMP6P22004 513 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 GPR15P49685 360 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 PSMC1P62191 440 aaKnown RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 SIGLEC14Q08ET2 396 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 BIRC3Q13489 604 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 MGAT5BQ3V5L5 792 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 INTS6LQ5JSJ4 861 aaKnown RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 TMC8Q8IU68 726 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 TMEM86AQ8N2M4 240 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 STKLD1Q8NE28 680 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 FGF14Q92915 247 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 MCRS1Q96EZ8 462 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 ZNF512Q96ME7 567 aaPredicted RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 MMS19Q96T76 1030 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 LRRC3Q9BY71 257 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 ZNF334Q9HCZ1 680 aaPredicted RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 AVENQ9NQS1 362 aaPredicted RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 RMND1Q9NWS8 449 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 FRMD4BQ9Y2L6 1034 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 R3HCC1Q9Y3T6 440 aaKnown RBP14.12□□□□□ -0.15
PRKDC-206ENST00000536429 NUMBLQ9Y6R0 609 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 WDFY4Q6ZS81 3184 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 TRIM49BA6NDI0 452 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 PHACTR2O75167 634 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 PDGFRBP09619 1106 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 HAPLN1P10915 354 aaPredicted RBP14.11□□□□□ -0.15
PRKDC-206ENST00000536429 MYL4P12829 197 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 WARSP23381 471 aaKnown RBP14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 VAMP7P51809 220 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 EPHA5P54756 1037 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 TSPY1Q01534 308 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 PPP3CAQ08209 521 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ADAM9Q13443 819 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 TRPC3Q13507 836 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 TDGQ13569 410 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 NCOA4Q13772 614 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 WDR72Q3MJ13 1102 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ZACNQ401N2 412 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 SDHAF4Q5VUM1 108 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 IQCEQ6IPM2 695 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 PDZD4Q76G19 769 aaPredicted RBP14.11□□□□□ -0.15
PRKDC-206ENST00000536429 SV2AQ7L0J3 742 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ELOA2Q8IYF1 753 aaPredicted RBP14.11□□□□□ -0.15
PRKDC-206ENST00000536429 FAM186BQ8IYM0 893 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ADSSL1Q8N142 457 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 SLC44A3Q8N4M1 653 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 TMC2Q8TDI7 906 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 GPR152Q8TDT2 470 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 GIPC2Q8TF65 315 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ZSWIM3Q96MP5 696 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ACBD6Q9BR61 282 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 SMYD3Q9H7B4 428 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 CRTAC1Q9NQ79 661 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.15
PRKDC-206ENST00000536429 IGSF9Q9P2J2 1179 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 NXF1Q9UBU9 619 aaKnown RBP14.11□□□□□ -0.15
PRKDC-206ENST00000536429 GTF3C4Q9UKN8 822 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 ZDBF2Q9HCK1 2354 aa14.11□□□□□ -0.15
PRKDC-206ENST00000536429 BIN1O00499 593 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 MAPK13O15264 365 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 LRRN2O75325 713 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 STAU1O95793 577 aaKnown RBP14.1□□□□□ -0.15
PRKDC-206ENST00000536429 COL9A1P20849 921 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 RAP1GAPP47736 663 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 GCLMP48507 274 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 LHX1P48742 406 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 EPHB3P54753 998 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 CDH8P55286 799 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 UBE2HP62256 183 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 MYL7Q01449 175 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 ZNF699Q32M78 642 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 EDRF1Q3B7T1 1238 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 COBLL1Q53SF7 1204 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 SPOPLQ6IQ16 392 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 DPH6Q7L8W6 267 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 DNAJB7Q7Z6W7 309 aaPredicted RBP14.1□□□□□ -0.15
PRKDC-206ENST00000536429 UBALD2Q8IYN6 164 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 DCP1BQ8IZD4 617 aaKnown RBP14.1□□□□□ -0.15
PRKDC-206ENST00000536429 ELMOD1Q8N336 334 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 SHKBP1Q8TBC3 707 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 SPATA18Q8TC71 538 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 KXD1Q9BQD3 176 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 SYT15Q9BQS2 421 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 SDCBP2Q9H190 292 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 ASAH2Q9NR71 780 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 HOOK1Q9UJC3 728 aaKnown RBP14.1□□□□□ -0.15
PRKDC-206ENST00000536429 DUSP12Q9UNI6 340 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 PCDHB5Q9Y5E4 795 aa14.1□□□□□ -0.15
PRKDC-206ENST00000536429 A0A1W2PRU2 124 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms