RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FGFR4P22455 802 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 IVDP26440 423 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 ADCY2Q08462 1091 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 ORC1Q13415 861 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 SLC10A6Q3KNW5 377 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF667Q5HYK9 610 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 PPP1R15BQ5SWA1 713 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 DENND1BQ6P3S1 775 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 DNAJC24Q6P3W2 148 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 MTHFD1LQ6UB35 978 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 ERICH1Q86X53 443 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 PGM2Q96G03 612 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 CYTH4Q9UIA0 394 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 SCN4AP35499 1836 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 PI4K2BG5E9Z4 385 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 CD19P15391 556 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 GTF2A2P52657 109 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 RAD23BP54727 409 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 CALCOCO2Q13137 446 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 DCUN1D2Q6PH85 259 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 PNMA8AQ86V59 439 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-202ENST00000535906 OTUD6BQ8N6M0 293 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 FAM129AQ9BZQ8 928 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 TJP2Q9UDY2 1190 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 ASIC3Q9UHC3 531 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 SLC45A1Q9Y2W3 748 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 ITGBL1O95965 494 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-202ENST00000535906 SMPD1P17405 629 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CDR1P51861 262 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 NFX1Q12986 1120 aaKnown RBP14.14□□□□□ -0.15
VPS33B-202ENST00000535906 PTK6Q13882 451 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 SLMAPQ14BN4 828 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 PTPN20Q4JDL3 420 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 MARCH8Q5T0T0 291 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 TXNRD3NBQ6F5E7 133 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-202ENST00000535906 DPP9Q86TI2 863 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 ATL2Q8NHH9 583 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 RAPGEF5Q92565 580 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CCDC114Q96M63 670 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 TWNKQ96RR1 684 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 SMYD3Q9H7B4 428 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 WHRNQ9P202 907 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 MORF4L1Q9UBU8 362 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 HMGXB4Q9UGU5 601 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CEP83Q9Y592 693 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 RARGP13631 454 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 KRT10P13645 584 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 YWHAEP62258 255 aaKnown RBP14.14□□□□□ -0.15
VPS33B-202ENST00000535906 TNFAIP2Q03169 654 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CCNG2Q16589 344 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 C6orf89Q6UWU4 347 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CROCCP2Q86T23 111 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CCDC25Q86WR0 208 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 UHMK1Q8TAS1 419 aaKnown RBP14.14□□□□□ -0.15
VPS33B-202ENST00000535906 CENPTQ96BT3 561 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 AAASQ9NRG9 546 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 NEU2Q9Y3R4 380 aa14.14□□□□□ -0.15
VPS33B-202ENST00000535906 COL1A2P08123 1366 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 RIPK2O43353 540 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-202ENST00000535906 RHBDF2Q6PJF5 856 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 SLC4A11Q8NBS3 891 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 GRK7Q8WTQ7 553 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 TMEM109Q9BVC6 243 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 LHX5Q9H2C1 402 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 ASB7Q9H672 318 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 C5orf60A6NFR6 353 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 ADCY6O43306 1168 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 TSPAN1O60635 241 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 GAS8O95995 478 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 ITIH2P19823 946 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 RFC1P35251 1148 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-202ENST00000535906 VPS41P49754 854 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 GRIK4Q16099 956 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 ZFYVE27Q5T4F4 411 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 C6orf118Q5T5N4 469 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 KAZNQ674X7 775 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 MFSD7Q6UXD7 560 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 SYDE1Q6ZW31 735 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-202ENST00000535906 ANKRD23Q86SG2 305 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 RCOR2Q8IZ40 523 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 ACSF2Q96CM8 615 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-202ENST00000535906 SNF8Q96H20 258 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 SLITRK1Q96PX8 696 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 HOMER3Q9NSC5 361 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 KAT6AQ92794 2004 aa14.13□□□□□ -0.15
VPS33B-202ENST00000535906 UNCXA6NJT0 531 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 GOLGA8SH3BPF8 625 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 FSBPO95073 299 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 MMP3P08254 477 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 POLR2BP30876 1174 aaKnown RBP14.12□□□□□ -0.15
VPS33B-202ENST00000535906 CHKAP35790 457 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 ITGA8P53708 1063 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 PIGHQ14442 188 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms