RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 LRRC32Q14392 662 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 SF3A1Q15459 793 aaKnown RBP19.5■□□□□ 0.71
UBXN1-216ENST00000533908 DGKKQ5KSL6 1271 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 LARP1BQ659C4 914 aaKnown RBP19.5■□□□□ 0.71
UBXN1-216ENST00000533908 PKN3Q6P5Z2 889 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 ZNF720Q7Z2F6 126 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 ZSWIM2Q8NEG5 633 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 CHFRQ96EP1 664 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 EPSTI1Q96J88 318 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 STRA6Q9BX79 667 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 TMLHEQ9NVH6 421 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 RAB23Q9ULC3 237 aa19.5■□□□□ 0.71
UBXN1-216ENST00000533908 KIF26AQ9ULI4 1882 aaPredicted RBP19.5■□□□□ 0.71
UBXN1-216ENST00000533908 OTOL1A6NHN0 477 aaPredicted RBP19.49■□□□□ 0.71
UBXN1-216ENST00000533908 TBCAO75347 108 aaKnown RBP19.49■□□□□ 0.71
UBXN1-216ENST00000533908 PPP1R37O75864 691 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 RETP07949 1114 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 HMGA1P17096 107 aaKnown RBP19.49■□□□□ 0.71
UBXN1-216ENST00000533908 TAF6P49848 677 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 ARHGAP15Q53QZ3 475 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 C1orf228Q6PIY5 440 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 DYMQ7RTS9 669 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 LONP2Q86WA8 852 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 SFR1Q86XK3 245 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 STKLD1Q8NE28 680 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 LARP4BQ92615 738 aaKnown RBP19.49■□□□□ 0.71
UBXN1-216ENST00000533908 FAM84AQ96KN4 292 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 CNTNAP3BQ96NU0 1288 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 RTKNQ9BST9 563 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 CNTNAP3Q9BZ76 1288 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 CCSER1Q9C0I3 900 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 GKN1Q9NS71 199 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 CCL26Q9Y258 94 aa19.49■□□□□ 0.71
UBXN1-216ENST00000533908 EXTL3O43909 919 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 F11P03951 625 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 GPR15P49685 360 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 SLFN12LQ6IEE8 588 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 METTL23Q86XA0 190 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 THEM5Q8N1Q8 247 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 RIN3Q8TB24 985 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 FAM83CQ9BQN1 747 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 HPS4Q9NQG7 708 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 SEMA4GQ9NTN9 838 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 ABI2Q9NYB9 513 aaPredicted RBP19.48■□□□□ 0.71
UBXN1-216ENST00000533908 DSEQ9UL01 958 aa19.48■□□□□ 0.71
UBXN1-216ENST00000533908 KPNA7A9QM74 516 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 CDC25CP30307 473 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 NLRP12P59046 1061 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 VEPH1Q14D04 833 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 ITPRIPL2Q3MIP1 535 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 CMTM8Q8IZV2 173 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 SPPL2BQ8TCT7 592 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 POLR3BQ9NW08 1133 aaPredicted RBP19.47■□□□□ 0.71
UBXN1-216ENST00000533908 CLIC4Q9Y696 253 aa19.47■□□□□ 0.71
UBXN1-216ENST00000533908 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.46■□□□□ 0.71
UBXN1-216ENST00000533908 MYMKA6NI61 221 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 GDF9O60383 454 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 HOXA6P31267 233 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 CNR2P34972 360 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 MCM2P49736 904 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 POU5F1Q01860 360 aaKnown RBP19.46■□□□□ 0.71
UBXN1-216ENST00000533908 PTPAQ15257 358 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 SDHAF4Q5VUM1 108 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 TRIM68Q6AZZ1 485 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 FSTL4Q6MZW2 842 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 FAM160A2Q8N612 972 aaPredicted RBP19.46■□□□□ 0.71
UBXN1-216ENST00000533908 MAB21L3Q8N8X9 362 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 C2orf15Q8WU43 125 aaKnown RBP19.46■□□□□ 0.71
UBXN1-216ENST00000533908 POMGNT1Q8WZA1 660 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 USP13Q92995 863 aaPredicted RBP19.46■□□□□ 0.71
UBXN1-216ENST00000533908 DNAJC19Q96DA6 116 aa19.46■□□□□ 0.71
UBXN1-216ENST00000533908 FBRSL1Q9HCM7 1045 aaKnown RBP19.46■□□□□ 0.71
UBXN1-216ENST00000533908 SLC30A4O14863 429 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 LRP3O75074 770 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 BMP15O95972 392 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 ABCD1P33897 745 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 PXNP49023 591 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-216ENST00000533908 PLCB2Q00722 1185 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 TAF12Q16514 161 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 CSRP2Q16527 193 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 CCDC142Q17RM4 750 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 TXNDC8Q6A555 127 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 PRR23CQ6ZRP0 262 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 BRAPQ7Z569 592 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 SYNPOQ8N3V7 929 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 KRI1Q8N9T8 703 aaKnown RBP19.45■□□□□ 0.7
UBXN1-216ENST00000533908 CXorf38Q8TB03 319 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 PI4K2AQ9BTU6 479 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 EBF3Q9H4W6 596 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 TBC1D7Q9P0N9 293 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 PCDHB5Q9Y5E4 795 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 DENND4CQ5VZ89 1909 aa19.45■□□□□ 0.7
UBXN1-216ENST00000533908 ARSAP15289 507 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 CASP5P51878 434 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 SMARCB1Q12824 385 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 RUNX3Q13761 415 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 SV2CQ496J9 727 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 TMEM196Q5HYL7 178 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms