RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 SYT13Q7L8C5 426 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 PIP4P1Q86T03 277 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 PDZD3Q86UT5 571 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 ZBTB45Q96K62 511 aaPredicted RBP13.41□□□□□ -0.26
SVIP-205ENST00000533774 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
SVIP-205ENST00000533774 TUFT1Q9NNX1 390 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
SVIP-205ENST00000533774 URB1O60287 2271 aaKnown RBP13.4□□□□□ -0.26
SVIP-205ENST00000533774 FAM221BA6H8Z2 402 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 K7ERI5 159 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 LARGE1O95461 756 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 MARCKSP29966 332 aaPredicted RBP13.4□□□□□ -0.26
SVIP-205ENST00000533774 EFNA5P52803 228 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
SVIP-205ENST00000533774 SPAG1Q07617 926 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 SCRN1Q12765 414 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 ECM1Q16610 540 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 COL28A1Q2UY09 1125 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 CYP2U1Q7Z449 544 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 TMEM150AQ86TG1 271 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 CHCHD4Q8N4Q1 142 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 USP13Q92995 863 aaPredicted RBP13.4□□□□□ -0.26
SVIP-205ENST00000533774 ACAP3Q96P50 834 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 NACC1Q96RE7 527 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 THG1LQ9NWX6 298 aaKnown RBP13.4□□□□□ -0.26
SVIP-205ENST00000533774 ASB3Q9Y575 518 aa13.4□□□□□ -0.26
SVIP-205ENST00000533774 ARHGEF35A5YM69 484 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 PPEF2O14830 753 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 NEMFO60524 1076 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 CDC45O75419 566 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 ATF6P18850 670 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 DRD1P21728 446 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 PSMA5P28066 241 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 GJA4P35212 333 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 AARSP49588 968 aaKnown RBP eCLIP13.39□□□□□ -0.27
SVIP-205ENST00000533774 GUCY2FP51841 1108 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 SIM1P81133 766 aaPredicted RBP13.39□□□□□ -0.27
SVIP-205ENST00000533774 CMTM8Q8IZV2 173 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 PIGKQ92643 395 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 P2RY13Q9BPV8 354 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 TMEM74BQ9NUR3 256 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
SVIP-205ENST00000533774 OR6C75A6NL08 312 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 MCF2P10911 925 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 HARSP12081 509 aaKnown RBP13.38□□□□□ -0.27
SVIP-205ENST00000533774 HNRNPLP14866 589 aaKnown RBP eCLIP13.38□□□□□ -0.27
SVIP-205ENST00000533774 NMT1P30419 496 aaKnown RBP13.38□□□□□ -0.27
SVIP-205ENST00000533774 MAPK8P45983 427 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 NPTX2P47972 431 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 DHPSP49366 369 aaPredicted RBP13.38□□□□□ -0.27
SVIP-205ENST00000533774 SEMA3BQ13214 749 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 PTPAQ15257 358 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 TRIM61Q5EBN2 209 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
SVIP-205ENST00000533774 DAW1Q8N136 415 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 FRMD1Q8N878 549 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 OR10T2Q8NGX3 314 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 IFT74Q96LB3 600 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 FSCN3Q9NQT6 498 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 EVLQ9UI08 416 aaPredicted RBP13.38□□□□□ -0.27
SVIP-205ENST00000533774 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
SVIP-205ENST00000533774 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
SVIP-205ENST00000533774 GOLGA4Q13439 2230 aaKnown RBP13.37□□□□□ -0.27
SVIP-205ENST00000533774 FGF19O95750 216 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 FDPSP14324 419 aaKnown RBP13.37□□□□□ -0.27
SVIP-205ENST00000533774 RPA1P27694 616 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 LRPAP1P30533 357 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 KRT2P35908 639 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 SCAPQ12770 1279 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 FBXO43Q4G163 708 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
SVIP-205ENST00000533774 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
SVIP-205ENST00000533774 RASSF3Q86WH2 238 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 MAB21L3Q8N8X9 362 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 STKLD1Q8NE28 680 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 GIPC2Q8TF65 315 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 MRPL4Q9BYD3 311 aaKnown RBP13.37□□□□□ -0.27
SVIP-205ENST00000533774 HAPLN2Q9GZV7 340 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 ARHGAP28Q9P2N2 729 aa13.37□□□□□ -0.27
SVIP-205ENST00000533774 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 F11P03951 625 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 CXCL8P10145 99 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 ENGP17813 658 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 CDC25CP30307 473 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 PTGER3P43115 390 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 PEX3P56589 373 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 PSMD2Q13200 908 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 USP39Q53GS9 565 aaKnown RBP13.36□□□□□ -0.27
SVIP-205ENST00000533774 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 ANO7Q6IWH7 933 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms