RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ASAH2Q9NR71 780 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 HPSEQ9Y251 543 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 GREB1Q4ZG55 1949 aa9.43□□□□□ -0.9
COPB1-210ENST00000533533 NUP210Q8TEM1 1887 aaPredicted RBP9.42□□□□□ -0.9
COPB1-210ENST00000533533 NCANO14594 1321 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 TISP43B9A030 160 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 ANKRD63C9JTQ0 380 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 ARNTLO00327 626 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 MAP3K13O43283 966 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 LRP3O75074 770 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 RETP07949 1114 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 CHRNB1P11230 501 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 CPB1P15086 417 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 GJA1P17302 382 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 CCNE1P24864 410 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 CXCL12P48061 93 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 CASP5P51878 434 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SATB1Q01826 763 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SPEM2Q0P670 501 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 ALCAMQ13740 583 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 TEAD2Q15562 447 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 LPAL2Q16609 132 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SLC10A6Q3KNW5 377 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 FAM26FQ5R3K3 315 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 L1TD1Q5T7N2 865 aaKnown RBP9.42□□□□□ -0.9
COPB1-210ENST00000533533 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 KRBA2Q6ZNG9 492 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 NELFCDQ8IXH7 590 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SPEM1Q8N4L4 309 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 E2F7Q96AV8 911 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 HVCN1Q96D96 273 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
COPB1-210ENST00000533533 FIZ1Q96SL8 496 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 FGFBP2Q9BYJ0 223 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 GPR88Q9GZN0 384 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 IKZF4Q9H2S9 585 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SLITRK6Q9H5Y7 841 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 OLFML3Q9NRN5 406 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 PCDHB8Q9UN66 801 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 SCN1AP35498 2009 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 IGF2RP11717 2491 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 LAMA1P25391 3075 aa9.42□□□□□ -0.9
COPB1-210ENST00000533533 ZFYVE26Q68DK2 2539 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 ATRXP46100 2492 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 FRMD3A2A2Y4 597 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 HEPACAM2A8MVW5 462 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 M0QZQ0 153 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 OGTO15294 1046 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 GADD45BO75293 160 aaPredicted RBP9.41□□□□□ -0.9
COPB1-210ENST00000533533 KRT37O76014 449 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 OAZ2O95190 189 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 VNN2O95498 520 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 CXCL8P10145 99 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 SPAG1Q07617 926 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 MCL1Q07820 350 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 KCNA1Q09470 495 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 GAS6Q14393 721 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 SLFN12LQ6IEE8 588 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 PRR23BQ6ZRT6 265 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 GLIS3Q8NEA6 775 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 BEST2Q8NFU1 509 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 SHKBP1Q8TBC3 707 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 NETO1Q8TDF5 533 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 CSGALNACT1Q8TDX6 532 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 RSPRY1Q96DX4 576 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 LRRC3Q9BY71 257 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 HAPLN2Q9GZV7 340 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 ST6GALNAC4Q9H4F1 302 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 TMEM206Q9H813 350 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 RPF1Q9H9Y2 349 aaKnown RBP9.41□□□□□ -0.9
COPB1-210ENST00000533533 TUBGCP4Q9UGJ1 667 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 METRNQ9UJH8 293 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 YIPF1Q9Y548 306 aa9.41□□□□□ -0.9
COPB1-210ENST00000533533 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
COPB1-210ENST00000533533 FAM237AA0A1B0GTK4 181 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 A0A1W2PRU2 124 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 CHURC1-FNTBB4DL54 471 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 SLC30A4O14863 429 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 CHADO15335 359 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 HRO43593 1189 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 PRPF40AO75400 957 aaKnown RBP9.4□□□□□ -0.9
COPB1-210ENST00000533533 PAPSS2O95340 614 aaPredicted RBP9.4□□□□□ -0.9
COPB1-210ENST00000533533 PIGRP01833 764 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 RPN1P04843 607 aaKnown RBP9.4□□□□□ -0.9
COPB1-210ENST00000533533 ADRB1P08588 477 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 CLTAP09496 248 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 LRPAP1P30533 357 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 CNR2P34972 360 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 TNFSF9P41273 254 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 FNTBP49356 437 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 AARSP49588 968 aaKnown RBP eCLIP9.4□□□□□ -0.94e-7■□□□□ 11.3
COPB1-210ENST00000533533 ACOT2P49753 483 aa9.4□□□□□ -0.9
COPB1-210ENST00000533533 KPNA1P52294 538 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms