RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZIC2O95409 532 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 PRKCBP05771 671 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 GLRA2P23416 452 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 CASP1P29466 404 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 CLCNKBP51801 687 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 CYP4A11Q02928 519 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 TWF1Q12792 350 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 GRSF1Q12849 480 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 CTTNQ14247 550 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 MCM6Q14566 821 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 UPP1Q16831 310 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 SV2BQ7L1I2 683 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 DEFB124Q8NES8 71 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 RAD54LQ92698 747 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 ADPGKQ9BRR6 497 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 TSPY26PQ9H489 355 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 KBTBD4Q9NVX7 518 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 OBP2AQ9NY56 170 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 KLK13Q9UKR3 277 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 DNM3Q9UQ16 869 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 FAM221BA6H8Z2 402 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 E9PMD0 336 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 I3L4J1 428 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 SYN3O14994 580 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 SMC2O95347 1197 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 MUTP22033 750 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 ADAMTS20P59510 1910 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 TYRO3Q06418 890 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 DPYDQ12882 1025 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 GSE1Q14687 1217 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 FAM187BQ17R55 369 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 UAP1L1Q3KQV9 507 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 ITPRIPL2Q3MIP1 535 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 C19orf48Q6RUI8 117 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 CD300LGQ6UXG3 332 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 ARID3BQ8IVW6 561 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 SHKBP1Q8TBC3 707 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 SMARCE1Q969G3 411 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 BLZF1Q9H2G9 400 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 MAGEF1Q9HAY2 307 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 THG1LQ9NWX6 298 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 EBF1Q9UH73 591 aa12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 AFF4Q9UHB7 1163 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-213ENST00000533149 A0A1W2PRU2 124 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 LRRIQ4A6NIV6 560 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 BIN1O00499 593 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 ZBTB39O15060 712 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 PLA2G4BP0C869 781 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 IGFBP6P24592 240 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 GBP1P32455 592 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 BRCC3P46736 316 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 AMPD3Q01432 767 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 LMAN2Q12907 356 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 PLD1Q13393 1074 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 CUL4BQ13620 913 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 TMEM196Q5HYL7 178 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 ISM2Q6H9L7 571 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 KCTD17Q8N5Z5 321 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 LARP4BQ92615 738 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 ZFYVE19Q96K21 471 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 CCDC43Q96MW1 224 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 PPP1R10Q96QC0 940 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 NACC1Q96RE7 527 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 C7orf25Q9BPX7 421 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 MKNK1Q9BUB5 465 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 LRRC27Q9C0I9 530 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 FZD8Q9H461 694 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 PDZD7Q9H5P4 517 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 FBXL5Q9UKA1 691 aa12.26□□□□□ -0.45
TRAPPC4-213ENST00000533149 DCLK1O15075 740 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 APBB3O95704 486 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 CAPNS1P04632 268 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 NLRP12P59046 1061 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 SIM1P81133 766 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 AMPD2Q01433 879 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 PRPF4BQ13523 1007 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 MRPL58Q14197 206 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 COL28A1Q2UY09 1125 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 GLRA4Q5JXX5 417 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 NT5DC1Q5TFE4 455 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 CYP2U1Q7Z449 544 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 ZBTB8OSQ8IWT0 167 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 C3orf58Q8NDZ4 430 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 SPATA20Q8TB22 786 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 BPIFB1Q8TDL5 484 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 HHIPQ96QV1 700 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 POLR3FQ9H1D9 316 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 ANKEF1Q9NU02 776 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 MAN1B1Q9UKM7 699 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 GDAQ9Y2T3 454 aa12.25□□□□□ -0.45
TRAPPC4-213ENST00000533149 MYMKA6NI61 221 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 TRDMT1O14717 391 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms