RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 DCAF17Q5H9S7 520 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 CT47A1Q5JQC4 288 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 TCERG1LQ5VWI1 586 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 C11orf57Q6ZUT1 292 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 INTS8Q75QN2 995 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 GET4Q7L5D6 327 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 DPH6Q7L8W6 267 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 TMEM86AQ8N2M4 240 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 LEMD2Q8NC56 503 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 FGF13Q92913 245 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 PBXIP1Q96AQ6 731 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 MKNK1Q9BUB5 465 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 MTMR12Q9C0I1 747 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 GDE1Q9NZC3 331 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 MAGEC2Q9UBF1 373 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 ARMCX3Q9UH62 379 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 SIX4Q9UIU6 781 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 ANK1P16157 1881 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 MYO10Q9HD67 2058 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 TRIOO75962 3097 aa13.9□□□□□ -0.18
TRAPPC4-212ENST00000533058 MTMR11A4FU01 709 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZNF197O14709 1029 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 MAPK13O15264 365 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 VNN2O95498 520 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 RHOP08100 348 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 KRT19P08727 400 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 EPHA5P54756 1037 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 BIRC3Q13489 604 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 HTR4Q13639 388 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 ANO6Q4KMQ2 910 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 WSCD1Q658N2 575 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 FOXR2Q6PJQ5 311 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 MTSS1LQ765P7 747 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 LIMS2Q7Z4I7 341 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 ELMOD1Q8N336 334 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 SLC44A3Q8N4M1 653 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 FBXL6Q8N531 539 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 C2orf15Q8WU43 125 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZNF512Q96ME7 567 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 RTP3Q9BQQ7 232 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZCWPW1Q9H0M4 648 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 MRPS23Q9Y3D9 190 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-212ENST00000533058 DOCK8Q8NF50 2099 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 LRRIQ3A6PVS8 624 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 STX10O60499 249 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 GNA14O95837 355 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 FAM163BP0C2L3 166 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 OR4Q2P0C623 313 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 BFSP1Q12934 665 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 DUSP4Q13115 394 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 TRPC3Q13507 836 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 PRSS36Q5K4E3 855 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 CYP4A22Q5TCH4 519 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 NPAS3Q8IXF0 933 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 TOP6BLQ8N6T0 577 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 OR5B17Q8NGF7 314 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 OR10T2Q8NGX3 314 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 ITFG1Q8TB96 612 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 PLEKHO2Q8TD55 490 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 PARD3BQ8TEW8 1205 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 ACBD6Q9BR61 282 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 METTL14Q9HCE5 456 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 CEP72Q9P209 647 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 WNT16Q9UBV4 365 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 YIPF1Q9Y548 306 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 ASB3Q9Y575 518 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 SCN1AP35498 2009 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 PTPRJQ12913 1337 aa13.88□□□□□ -0.19
TRAPPC4-212ENST00000533058 GABRDO14764 452 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 HUS1O60921 280 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 SRFP11831 508 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 MTIF2P46199 727 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 ALDH1A3P47895 512 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 TUFMP49411 452 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 NUBP1P53384 320 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 AP3M2P53677 418 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 DLG4P78352 724 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 CLDN10P78369 228 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 TWF1Q12792 350 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 PDZD4Q76G19 769 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 FRMD5Q7Z6J6 570 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms