RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DGKZQ13574 1117 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 RUBCNQ92622 972 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 EHD4Q9H223 541 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SYNDIG1LA6NDD5 238 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 APRTP07741 180 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 GUCY2CP25092 1073 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SREBF1P36956 1147 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 TWF1Q12792 350 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 ELOA2Q8IYF1 753 aaPredicted RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 CYP2W1Q8TAV3 490 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 GRAMD1AQ96CP6 724 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 TRIM4Q9C037 500 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 ENTPD7Q9NQZ7 604 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SLIT1O75093 1534 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SYTL5Q8TDW5 730 aaPredicted RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 PTPRN2Q92932 1015 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 USP13Q92995 863 aaPredicted RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 YY1AP1Q9H869 796 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 KIF17Q9P2E2 1029 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 RNF103-CHMP3A0A140T963 221 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 KPNA6O60684 536 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 OCM2P0CE71 109 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 OCMP0CE72 109 aaPredicted RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 DSG3P32926 999 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 E2F5Q15329 346 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SEC23AQ15436 765 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 DACT2Q5SW24 774 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 CBWD2Q8IUF1 395 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 ATP6V0D2Q8N8Y2 350 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 P2RX7Q99572 595 aaKnown RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 RUBCNLQ9H714 662 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 DPP7Q9UHL4 492 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SNX5Q9Y5X3 404 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 EGFRP00533 1210 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 GPC2Q8N158 579 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 C1orf131Q8NDD1 294 aaKnown RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 CDCA5Q96FF9 252 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 OSMRQ99650 979 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SPATA16Q9BXB7 569 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 LRRC4BQ9NT99 713 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 MRGBPQ9NV56 204 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 ADA2Q9NZK5 511 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 PAK5Q9P286 719 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 TPX2Q9ULW0 747 aaKnown RBP15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 USP20Q9Y2K6 914 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SPAG6O75602 509 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SLC26A2P50443 739 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 STARD7Q9NQZ5 370 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 RAB6BQ9NRW1 208 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SUFUQ9UMX1 484 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 CASTOR2A6NHX0 329 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 GPD1P21695 349 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 NPTX2P47972 431 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SLC11A2P49281 568 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 EIF2B5Q13144 721 aaKnown RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SELENONQ9NZV5 590 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SYCE1LA8MT33 242 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 VWA5AO00534 786 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 PQBP1O60828 265 aaKnown RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 EFCAB14O75071 495 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 CD44P16070 742 aaKnown RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 PDCLQ13371 301 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 PPP4R4Q6NUP7 873 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 ARMC6Q6NXE6 501 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 A0A087WZ62 844 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SGPL1O95470 568 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SLURP2P0DP57 97 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 APOBEC3HQ6NTF7 200 aaKnown RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 MOXD1Q6UVY6 613 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 NR1H4Q96RI1 486 aaPredicted RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 FDXACB1Q9BRP7 624 aaPredicted RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 ANLNQ9NQW6 1124 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SCHIP1Q9P0W5 487 aaPredicted RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 DNAJB2P25686 324 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 ADORA2AP29274 412 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 C1orf146Q5VVC0 180 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 ACOT1Q86TX2 421 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 TRAPPC12Q8WVT3 735 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 SEPT8Q92599 483 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 CBWD1Q9BRT8 395 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 LRRC1Q9BTT6 524 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 FAM129AQ9BZQ8 928 aa15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 ZC3H7BQ9UGR2 993 aaKnown RBP15.44■□□□□ 0.06
PCDHA9-202ENST00000532602 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ITIH6Q6UXX5 1313 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ST13P4Q8IZP2 240 aaPredicted RBP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ASCC2Q9H1I8 757 aaPredicted RBP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 KCNF1Q9H3M0 494 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 B3GAT3O94766 335 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ITIH2P19823 946 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 SPDYE7PQ495Y7 208 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 BEND6Q5SZJ8 279 aaPredicted RBP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 KLHDC7AQ5VTJ3 777 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 MRPS31Q92665 395 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms