RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	TRIM71	Q2Q1W2	868 aa	Known RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	TKFC	Q3LXA3	575 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	ZBED9	Q6R2W3	1325 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	LRRC8D	Q7L1W4	858 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	ZC3H18	Q86VM9	953 aa	Known RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	MIB1	Q86YT6	1006 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	RPAP2	Q8IXW5	612 aa	Predicted RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	NME8	Q8N427	588 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	FNIP1	Q8TF40	1166 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	EAF2	Q96CJ1	260 aa	Predicted RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	CHAMP1	Q96JM3	812 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	WDR11	Q9BZH6	1224 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	LMAN2L	Q9H0V9	348 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	EPB41L1	Q9H4G0	881 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	NGRN	Q9NPE2	291 aa	Known RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	LUC7L	Q9NQ29	371 aa	Known RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	GPR27	Q9NS67	375 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	ATP8A2	Q9NTI2	1148 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	CD207	Q9UJ71	328 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	FEM1B	Q9UK73	627 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	PNMA2	Q9UL42	364 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	NOB1	Q9ULX3	412 aa	Known RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	SYNPO2	Q9UMS6	1093 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	SIT1	Q9Y3P8	196 aa		6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	DDX49	Q9Y6V7	483 aa	Known RBP	6.63	□□□□□ -1.35
PUM1-222	ENST00000531867	DMD	P11532	3685 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	NKRF	O15226	690 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	SGSM2	O43147	1006 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	DLX3	O60479	287 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	RB1	P06400	928 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	PDE6A	P16499	860 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	ICAM3	P32942	547 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	COASY	Q13057	564 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	NFE2	Q16621	373 aa	Predicted RBP	6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	FAM47C	Q5HY64	1035 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	DENND5A	Q6IQ26	1287 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	ADSSL1	Q8N142	457 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	LCORL	Q8N3X6	602 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	SMRP1	Q8NCR6	262 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	SMARCC2	Q8TAQ2	1214 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	SSH3	Q8TE77	659 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	ARHGAP45	Q92619	1136 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	TOP1MT	Q969P6	601 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	MFSD3	Q96ES6	412 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	ZFYVE21	Q9BQ24	234 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	BCAS3	Q9H6U6	928 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	ARHGEF4	Q9NR80	690 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	CYP39A1	Q9NYL5	469 aa		6.62	□□□□□ -1.35
PUM1-222	ENST00000531867	ZNF532	Q9HCE3	1301 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	CYP2D7	A0A087X1C5	515 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	CCDC189	A1A4V9	331 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	ARNTL	O00327	626 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	PRKAB2	O43741	272 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	MAFK	O60675	156 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	PLA2G6	O60733	806 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	DGKI	O75912	1065 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	ASMTL	O95671	621 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	AMH	P03971	560 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	PLA2G1B	P04054	148 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	GNAI2	P04899	355 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	SLFN5	Q08AF3	891 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	CAMK1	Q14012	370 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	DHX8	Q14562	1220 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	TTF1	Q15361	905 aa	Predicted RBP	6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	CLUL1	Q15846	466 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	SLC9C2	Q5TAH2	1124 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	MCTP2	Q6DN12	878 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	EP400NL	Q6ZTU2	488 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	USP53	Q70EK8	1073 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	MILR1	Q7Z6M3	343 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	TRMT2A	Q8IZ69	625 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	GMCL1P1	Q8NEA9	526 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	OR6J1	Q8NGC5	347 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	DCAF4	Q8WV16	495 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	KAT2B	Q92831	832 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	NKD2	Q969F2	451 aa	Predicted RBP	6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	RMDN1	Q96DB5	314 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	IL17RA	Q96F46	866 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	RIPOR3	Q96MK2	946 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	SENP7	Q9BQF6	1050 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	CAAP1	Q9H8G2	361 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	SMC4	Q9NTJ3	1288 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	RNF146	Q9NTX7	359 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	EPG5	Q9HCE0	2579 aa		6.61	□□□□□ -1.35
PUM1-222	ENST00000531867	RAD50	Q92878	1312 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	DNAH14	Q0VDD8	3507 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	SH3D21	A4FU49	640 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	IFRD1	O00458	451 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	FFAR3	O14843	346 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	HGS	O14964	777 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	LINC01565	O15544	149 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	PRODH	O43272	600 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	CT47B1	P0C2W7	299 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	PABPC1	P11940	636 aa	Known RBP	6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	LCP1	P13796	627 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	ATF7	P17544	494 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	HOXA5	P20719	270 aa		6.6	□□□□□ -1.35
PUM1-222	ENST00000531867	EDNRB	P24530	442 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms