RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ADAM9Q13443 819 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 BECN1Q14457 450 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC9C2Q5TAH2 1124 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ATG16L1Q676U5 607 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 INO80CQ6PI98 192 aaPredicted RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 TAS1R1Q7RTX1 841 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ADSSL1Q8N142 457 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 PQLC1Q8N2U9 271 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 CELF5Q8N6W0 485 aaKnown RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 RSPH1Q8WYR4 309 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SPSB4Q96A44 273 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 DYDC2Q96IM9 177 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 REEP2Q9BRK0 252 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SOX7Q9BT81 388 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 EDEM3Q9BZQ6 932 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ABHD16BQ9H3Z7 469 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 FAM83DQ9H4H8 585 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ZBTB26Q9HCK0 441 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ABCF3Q9NUQ8 709 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 POLR3BQ9NW08 1133 aaPredicted RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 PLA2G3Q9NZ20 509 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 TBC1D14Q9P2M4 693 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 MORF4L1Q9UBU8 362 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 C19orf53Q9UNZ5 99 aaPredicted RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 DERAQ9Y315 318 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 PLEKHM1Q9Y4G2 1056 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SNX5Q9Y5X3 404 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 RBAK-RBAKDNI3L0D1 243 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 GUCY1B2O75343 617 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 TBCAO75347 108 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 AHSGP02765 367 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 HNRNPA1P09651 372 aaKnown RBP eCLIP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 MTHFD1P11586 935 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 XRCC6P12956 609 aaKnown RBP eCLIP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 SCG2P13521 617 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 IL2RBP14784 551 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 BTF3P20290 206 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ADSLP30566 484 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ADMP35318 185 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ARL3P36405 182 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 DLG4P78352 724 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 EXOSC9Q06265 439 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 EPS8Q12929 822 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 CTBP1Q13363 440 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 MTM1Q13496 603 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 SMAD1Q15797 465 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ARHGAP15Q53QZ3 475 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 SNX30Q5VWJ9 437 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 MCTP2Q6DN12 878 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 NAA16Q6N069 864 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 MFSD5Q6N075 450 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 SHISA2Q6UWI4 295 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 DPP8Q6V1X1 898 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 LRRC8DQ7L1W4 858 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 KDELC2Q7Z4H8 507 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 R3HCC1LQ7Z5L2 792 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 PDSS2Q86YH6 399 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 SPPL2CQ8IUH8 684 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 TEX11Q8IYF3 940 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 CCDC105Q8IYK2 499 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ZNF713Q8N859 430 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ARRDC4Q8NCT1 418 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 TOR1AIP2Q8NFQ8 470 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 CCHCR1Q8TD31 782 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 ASB11Q8WXH4 323 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 TNPO1Q92973 898 aaKnown RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 TRAPPC9Q96Q05 1148 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 UHRF1Q96T88 793 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 SSBP4Q9BWG4 385 aaPredicted RBP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 PCDHAC1Q9H158 963 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 EPS8L2Q9H6S3 715 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 XPNPEP3Q9NQH7 507 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 TMLHEQ9NVH6 421 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 NDUFAF4Q9P032 175 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 NFU1Q9UMS0 254 aa4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.82□□□□□ -1.64
AC055878.1-201ENST00000531858 A0A087WZ62 844 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 OR2W5A6NFC9 320 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TSPY2A6NKD2 308 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SMTNL1A8MU46 457 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 PI4K2BG5E9Z4 385 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MYO1CO00159 1063 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 KIAA0355O15063 1070 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 PRAMEF4O60810 478 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 GNAI2P04899 355 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ADRB2P07550 413 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TSPY3P0CV98 308 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TSPY8P0CW00 308 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CYP2C9P11712 490 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ATP6V1B1P15313 513 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MUTP22033 750 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ACVR2AP27037 513 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SSTR4P31391 388 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ARL1P40616 181 aaPredicted RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MLH1P40692 756 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 PRKAA2P54646 552 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 BCAT1P54687 386 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms