RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 ARNTLO00327 626 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 CHADO15335 359 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 CUTAO60888 179 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
RPS3-216ENST00000530721 CDC25CP30307 473 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 TSPY1Q01534 308 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 FCHO2Q0JRZ9 810 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 FZD5Q13467 585 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 GPR158Q5T848 1215 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
RPS3-216ENST00000530721 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 IQUBQ8NA54 791 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 FAM3CQ92520 227 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 DHX58Q96C10 678 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 GCNAQ96QF7 691 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 PDE11AQ9HCR9 933 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 ABI2Q9NYB9 513 aaPredicted RBP13.8□□□□□ -0.2
RPS3-216ENST00000530721 PIAS3Q9Y6X2 628 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 COL4A2P08572 1712 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
RPS3-216ENST00000530721 DPYSL4O14531 572 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
RPS3-216ENST00000530721 HUS1O60921 280 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
RPS3-216ENST00000530721 KRT19P08727 400 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 TMEM191BP0C7N4 346 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 CDR1P51861 262 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 MLLT6P55198 1093 aaPredicted RBP13.79□□□□□ -0.2
RPS3-216ENST00000530721 ASIC1P78348 528 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 RBP5P82980 135 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 BFSP1Q12934 665 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 TAF12Q16514 161 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
RPS3-216ENST00000530721 CNNM4Q6P4Q7 775 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 C1orf228Q6PIY5 440 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 SHC4Q6S5L8 630 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 TMEM86AQ8N2M4 240 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 GLIS3Q8NEA6 775 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 CSGALNACT1Q8TDX6 532 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 RSPRY1Q96DX4 576 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 MSANTD3Q96H12 275 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 ANKRD36BP1Q96IX9 119 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 IER2Q9BTL4 223 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 MTMR12Q9C0I1 747 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 MAGEF1Q9HAY2 307 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 GDAP2Q9NXN4 497 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 NDRG2Q9UN36 371 aaKnown RBP13.79□□□□□ -0.2
RPS3-216ENST00000530721 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 PCDHB5Q9Y5E4 795 aa13.79□□□□□ -0.2
RPS3-216ENST00000530721 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 ZNF233A6NK53 670 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 WEE1P30291 646 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 CYP4F8P98187 520 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 MYL7Q01449 175 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 CSTF1Q05048 431 aaKnown RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 SURF1Q15526 300 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 FOXD4L5Q5VV16 416 aaPredicted RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 TOP6BLQ8N6T0 577 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 GIPC2Q8TF65 315 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 FOXD4L4Q8WXT5 416 aaPredicted RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 HPS3Q969F9 1004 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 IL21Q9HBE4 155 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 PRMT8Q9NR22 394 aaPredicted RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 TMLHEQ9NVH6 421 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 DDX43Q9NXZ2 648 aaKnown RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 SIX4Q9UIU6 781 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 R3HCC1Q9Y3T6 440 aaKnown RBP13.78□□□□□ -0.2
RPS3-216ENST00000530721 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 SNX9Q9Y5X1 595 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 SPTBN4Q9H254 2564 aa13.78□□□□□ -0.2
RPS3-216ENST00000530721 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
RPS3-216ENST00000530721 F13A1P00488 732 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 TNNC2P02585 160 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 CCNE1P24864 410 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 HOXD13P35453 343 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 LHX1P48742 406 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 MYO1EQ12965 1108 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 MTAPQ13126 283 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 ARHGAP29Q52LW3 1261 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.21
RPS3-216ENST00000530721 FAM26FQ5R3K3 315 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 LMBRD2Q68DH5 695 aaPredicted RBP13.77□□□□□ -0.21
RPS3-216ENST00000530721 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
RPS3-216ENST00000530721 ATL3Q6DD88 541 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms