RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 HAUS2Q9NVX0 235 aa17.73■□□□□ 0.43
CAPRIN1-207ENST00000529307 HES2Q9Y543 173 aa17.73■□□□□ 0.43
CAPRIN1-207ENST00000529307 CYP1A2P05177 515 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 ELNP15502 786 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 CCND3P30281 292 aaPredicted RBP17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 HADHBP55084 474 aaKnown RBP17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 BZW1Q7L1Q6 419 aaKnown RBP17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 C3orf20Q8ND61 904 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 SPATA4Q8NEY3 305 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 SNTG2Q9NY99 539 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 CEP350Q5VT06 3117 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 KCNK3O14649 394 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 SEPT4O43236 478 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 ATP1A2P50993 1020 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 SP3Q02447 781 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 KYAT1Q16773 422 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 SLC27A1Q6PCB7 646 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 PASD1Q8IV76 773 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 SYCE1Q8N0S2 351 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 KLHL23Q8NBE8 558 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 ZNF653Q96CK0 615 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 MTG1Q9BT17 334 aaPredicted RBP17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 NXF1Q9UBU9 619 aaKnown RBP17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 GTF3C4Q9UKN8 822 aa17.72■□□□□ 0.43
CAPRIN1-207ENST00000529307 ENO4A6NNW6 628 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 RAP1GAPP47736 663 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 TMEM132DQ14C87 1099 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 DCAF4L1Q3SXM0 396 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 ZNF394Q53GI3 561 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 C2CD6Q53TS8 623 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 SDCBP2Q9H190 292 aa17.71■□□□□ 0.43
CAPRIN1-207ENST00000529307 AHCYL1O43865 530 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 ADAMTS4O75173 837 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 COQ9O75208 318 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 SMNDC1O75940 238 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■■□□□ 13.3
CAPRIN1-207ENST00000529307 MTA2O94776 668 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 FESP07332 822 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 RNASE9P60153 205 aaKnown RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 NNTQ13423 1086 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 TBC1D25Q3MII6 688 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 ACCSLQ4AC99 568 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 ANKRD20A8PQ5CZ79 823 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 LLGL2Q6P1M3 1020 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 CPNE8Q86YQ8 564 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 NSMCE1Q8WV22 266 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 WNT8BQ93098 351 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 BTBD6Q96KE9 485 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 ZMAT2Q96NC0 199 aaKnown RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 NUP85Q9BW27 656 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 CORO1CQ9ULV4 474 aaPredicted RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 DDX3YO15523 660 aaKnown RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 THAP12O43422 761 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 POLR2BP30876 1174 aaKnown RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 CDH8P55286 799 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 CENPCQ03188 943 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 WDR72Q3MJ13 1102 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 LACTB2Q53H82 288 aaPredicted RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 CCDC181Q5TID7 509 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 NOTUMQ6P988 496 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 EMBQ6PCB8 327 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 MCOLN2Q8IZK6 566 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 ZNF606Q8WXB4 792 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 NXF3Q9H4D5 531 aaKnown RBP17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 RNF19AQ9NV58 838 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 AMFRQ9UKV5 643 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 C2CD2Q9Y426 696 aa17.7■□□□□ 0.42
CAPRIN1-207ENST00000529307 DNM1LO00429 736 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 LIN7AO14910 233 aaPredicted RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 KPNA6O60684 536 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 RARBP10826 455 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 EPHB4P54760 987 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 NOMO3P69849 1222 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 NKX3-2P78367 333 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 GUCY1A3Q02108 690 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 ITIH3Q06033 890 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 SNX1Q13596 522 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 CFAP221Q4G0U5 840 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 PHLDB2Q86SQ0 1253 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 TFAP2BQ92481 460 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 TAF4BQ92750 862 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 P3H4Q92791 437 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 BCO2Q9BYV7 579 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 SMYD3Q9H7B4 428 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 RBM12Q9NTZ6 932 aaKnown RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 CNOT8Q9UFF9 292 aaKnown RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 GTF2IRD1Q9UHL9 959 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 PIN4Q9Y237 131 aaKnown RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 ALG6Q9Y672 507 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 ATP6V1G2O95670 118 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 GNAT1P11488 350 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 MDH1P40925 334 aaKnown RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 CRYBB1P53674 252 aaPredicted RBP17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 ZNF667Q5HYK9 610 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 UBXN11Q5T124 520 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 ZNF564Q8TBZ8 553 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms