RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GABPA	Q06546	454 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	SRSF5	Q13243	272 aa	Known RBP	5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	NMI	Q13287	307 aa	Predicted RBP	5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	FZD5	Q13467	585 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	SLC10A6	Q3KNW5	377 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	COLEC12	Q5KU26	742 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	ARMC3	Q5W041	872 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	HSCB	Q8IWL3	235 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	ANKRD42	Q8N9B4	389 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	FAM181A	Q8N9Y4	354 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	PPHLN1	Q8NEY8	458 aa	Known RBP	5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	VPS37A	Q8NEZ2	397 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	TRIM44	Q96DX7	344 aa	Predicted RBP	5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	DDX23	Q9BUQ8	820 aa	Known RBP	5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	SELENOO	Q9BVL4	669 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	TEX13B	Q9BXU2	312 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	SMOC1	Q9H4F8	434 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	VCPKMT	Q9H867	229 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	ARHGEF3	Q9NR81	526 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	GPATCH2	Q9NW75	528 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	RNF112	Q9ULX5	631 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	TMX2	Q9Y320	296 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636		U3KQE9	123 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	LAMA4	Q16363	1823 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	F8	P00451	2351 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	EML5	Q05BV3	1969 aa		5.82	□□□□□ -1.48
PABPC1-223	ENST00000523636	SHISA7	A6NL88	538 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	AGRP	O00253	132 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	FIBP	O43427	364 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	AKAP10	O43572	662 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	DGKI	O75912	1065 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	RASGRP1	O95267	797 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	F2	P00734	622 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	IGHD	P01880	384 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	HOXC13	P31276	330 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	CPT1A	P50416	773 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	ZNF445	P59923	1031 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	ZBED6	P86452	979 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	ITIH3	Q06033	890 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	SCAP	Q12770	1279 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	BTG3	Q14201	252 aa	Predicted RBP	5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	MTERF2	Q49AM1	385 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	AASDH	Q4L235	1098 aa	Predicted RBP	5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	HYI	Q5T013	277 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	SLC44A3	Q8N4M1	653 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	CHCHD4	Q8N4Q1	142 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	ARHGEF39	Q8N4T4	335 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	DAGLB	Q8NCG7	672 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	LINC01599	Q8WXQ3	324 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	GOLGA1	Q92805	767 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	MISP3	Q96FF7	219 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	HDAC6	Q9UBN7	1215 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	ACAD8	Q9UKU7	415 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	HCFC2	Q9Y5Z7	792 aa		5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.81	□□□□□ -1.48
PABPC1-223	ENST00000523636	NIPBL	Q6KC79	2804 aa	eCLIP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	PTPRB	P23467	1997 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	EMSY	Q7Z589	1322 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	GREB1L	Q9C091	1923 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	ATP2A1	O14983	1001 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	TGFB1	P01137	390 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	ITIH2	P19823	946 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	MTHFR	P42898	656 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	SARS	P49591	514 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	GATM	P50440	423 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	DYNLL1	P63167	89 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	SNW1	Q13573	536 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	LONRF2	Q1L5Z9	754 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	MSMP	Q1L6U9	139 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	RARS2	Q5T160	578 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	PLPP4	Q5VZY2	271 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	POMZP3	Q6PJE2	187 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	TMC3	Q7Z5M5	1100 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	ADAT2	Q7Z6V5	191 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	THNSL2	Q86YJ6	484 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	EGFL6	Q8IUX8	553 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	NDUFAF2	Q8N183	169 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	LRRC47	Q8N1G4	583 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	ANKRD35	Q8N283	1001 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	PLD6	Q8N2A8	252 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	CELF5	Q8N6W0	485 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	ZNF655	Q8N720	491 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	OR6J1	Q8NGC5	347 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	SKA1	Q96BD8	255 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	SERINC2	Q96SA4	455 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	MYL10	Q9BUA6	226 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	HDAC8	Q9BY41	377 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	WDR11	Q9BZH6	1224 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	CXorf56	Q9H5V9	222 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	A1CF	Q9NQ94	594 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	CHST7	Q9NS84	486 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	ZMYM5	Q9UJ78	669 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	RCAN3	Q9UKA8	241 aa		5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	SF3B6	Q9Y3B4	125 aa	Known RBP	5.8	□□□□□ -1.48
PABPC1-223	ENST00000523636	HIVEP1	P15822	2718 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms