RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MTO1Q9Y2Z2 717 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 LAMB1P07942 1786 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PLIN4Q96Q06 1357 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PPEF1O14829 653 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PRPF4O43172 522 aaKnown RBP eCLIP13.48□□□□□ -0.253e-6■■■■□ 20.5
TRAPPC9-208ENST00000520857 CD19P15391 556 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 GSTT1P30711 240 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 RARRES1P49788 294 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PTK7Q13308 1070 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 RINLQ6ZS11 566 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 RGS9BPQ6ZS82 235 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 RASSF3Q86WH2 238 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.254e-7■■■□□ 18.4
TRAPPC9-208ENST00000520857 CYP4F11Q9HBI6 524 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 TAS2R1Q9NYW7 299 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 USP1O94782 785 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 ABHD2P08910 425 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 ACOT2P49753 483 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 AP2B1P63010 937 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PDCD2Q16342 344 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PLEKHG4Q58EX7 1191 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLC26A7Q8TE54 656 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 CEP170P1Q96L14 293 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 CALN1Q9BXU9 219 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.258e-7■■■■■ 45.8
TRAPPC9-208ENST00000520857 KCNH7Q9NS40 1196 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 CCPG1Q9ULG6 757 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 IVNS1ABPQ9Y6Y0 642 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 A0A1B0GVG6 124 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 PSTPIP1O43586 416 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 AMPD1P23109 780 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 MTMR2Q13614 643 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 KCNT1Q5JUK3 1230 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 ALYREFQ86V81 257 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 ST13P4Q8IZP2 240 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 ENDOVQ8N8Q3 282 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 EXD1Q8NHP7 514 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 CHURC1Q8WUH1 139 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 PCSK1NQ9UHG2 260 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 TCP10L2B9ZVM9 353 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 LIASO43766 372 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 RPL7AP62424 266 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 GAD2Q05329 585 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 DYNC1I2Q13409 638 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 SENP7Q9BQF6 1050 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 WDR35Q9P2L0 1181 aa13.47□□□□□ -0.25
TRAPPC9-208ENST00000520857 KLHL33A6NCF5 533 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 RTN3O95197 1032 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 PYGBP11216 843 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 GCLCP48506 637 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 NEK3P51956 506 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 CDK16Q00536 496 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 MORF4L2Q15014 288 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 GRAMD1BQ3KR37 738 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 C1orf220Q5T0J3 134 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 NLRX1Q86UT6 975 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 RFX6Q8HWS3 928 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 RCOR2Q8IZ40 523 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 C8orf37Q96NL8 207 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 NMUR2Q9GZQ4 415 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 TBX20Q9UMR3 447 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 RREB1Q92766 1687 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 ABLIM1O14639 778 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 CREB3O43889 395 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 TCF4P15884 667 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 GLRA2P23416 452 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 DSG1Q02413 1049 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 PRPF39Q86UA1 669 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 DENND1AQ8TEH3 1009 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 OXNAD1Q96HP4 312 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 IP6K2Q9UHH9 426 aa13.46□□□□□ -0.25
TRAPPC9-208ENST00000520857 F8VP50 259 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 TOM1L1O75674 476 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 HLA-DRAP01903 254 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 TMEM132AQ24JP5 1023 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 PARVAQ9NVD7 372 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 XPO7Q9UIA9 1087 aaKnown RBP13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 MAD1L1Q9Y6D9 718 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.26
TRAPPC9-208ENST00000520857 MEI4A8MW99 385 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 CST8O60676 142 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms