RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 AFMP43652 599 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 EPHA5P54756 1037 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 RBP5P82980 135 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 CSTF1Q05048 431 aaKnown RBP17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 FAM26FQ5R3K3 315 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 SHC4Q6S5L8 630 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 CEP57L1Q8IYX8 460 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 ADSSL1Q8N142 457 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 C1orf127Q8N9H9 656 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 TTC8Q8TAM2 541 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 C2orf15Q8WU43 125 aaKnown RBP17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 E2F7Q96AV8 911 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 ANK1P16157 1881 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 WDFY4Q6ZS81 3184 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 ZNF233A6NK53 670 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 MAN2B1O00754 1011 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 KIAA0391O15091 583 aaKnown RBP17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 SP9P0CG40 484 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 ATF6P18850 670 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 CASP1P29466 404 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 CDC25CP30307 473 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 CYP2J2P51589 502 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 MYO1EQ12965 1108 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 ADGRF2Q8IZF7 708 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 PDCL2Q8N4E4 241 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 STKLD1Q8NE28 680 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 FAM3CQ92520 227 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 FNBP1Q96RU3 617 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 NELL2Q99435 816 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 HSPBP1Q9NZL4 362 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 DLGAP2Q9P1A6 1054 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
IGHV3-42-201ENST00000520410 MIA3Q5JRA6 1907 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 SLC38A8A6NNN8 435 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 CLIC2O15247 247 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 DLATP10515 647 aaKnown RBP17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 HAPLN1P10915 354 aaPredicted RBP17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 TNNI1P19237 187 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 MAGEA9P43362 315 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 SMARCB1Q12824 385 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 SURF1Q15526 300 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 E2F4Q16254 413 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 SDHAF4Q5VUM1 108 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 CBWD2Q8IUF1 395 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 SPATA2LQ8IUW3 424 aaPredicted RBP17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 ARID3BQ8IVW6 561 aaPredicted RBP17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 MFSD6LQ8IWD5 586 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 LRRC52Q8N7C0 313 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 MMS19Q96T76 1030 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 DDX23Q9BUQ8 820 aaKnown RBP17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 KBTBD4Q9NVX7 518 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 CFAP45Q9UL16 551 aa17.35■□□□□ 0.37
IGHV3-42-201ENST00000520410 EIF3DO15371 548 aaKnown RBP eCLIP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 LMNAP02545 664 aaKnown RBP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 CCNE1P24864 410 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 GPR15P49685 360 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 DNM1Q05193 864 aaKnown RBP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 NFE2Q16621 373 aaPredicted RBP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 GAREM2Q75VX8 874 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 HS2ST1Q7LGA3 356 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 TMEM86AQ8N2M4 240 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 ZFYVE19Q96K21 471 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 OSBPL6Q9BZF3 934 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 SMG9Q9H0W8 520 aaKnown RBP17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 SLC39A2Q9NP94 309 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 HSFX1Q9UBD0 423 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
IGHV3-42-201ENST00000520410 NCANO14594 1321 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 AVPR1AP37288 418 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 PKP1Q13835 747 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 DUOXA2Q1HG44 320 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 INTS6LQ5JSJ4 861 aaKnown RBP17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 UNC13DQ70J99 1090 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 GRAMD1CQ8IYS0 662 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 OR5B17Q8NGF7 314 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 CCDC127Q96BQ5 260 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 RSPRY1Q96DX4 576 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 BORCS6Q96GS4 357 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 HPDLQ96IR7 371 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 TASP1Q9H6P5 420 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 KIAA1586Q9HCI6 787 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 TRPC7Q9HCX4 862 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 TMLHEQ9NVH6 421 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 INTS13Q9NVM9 706 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 GTF3C4Q9UKN8 822 aa17.33■□□□□ 0.36
IGHV3-42-201ENST00000520410 SCN1AP35498 2009 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 TICRRQ7Z2Z1 1910 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 HCRTO43612 131 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 CSH1P0DML2 217 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 CSH2P0DML3 217 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 PCSK1P29120 753 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 SOX9P48436 509 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms