RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 RNF14Q9UBS8 474 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 CHORDC1Q9UHD1 332 aaPredicted RBP15.41■□□□□ 0.06
CLN8-204ENST00000519254 PCDHB7Q9Y5E2 793 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 SCN1AP35498 2009 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
CLN8-204ENST00000519254 ACRP10323 421 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 GNA15P30679 374 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 IKBKEQ14164 716 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 CCDC181Q5TID7 509 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 MFSD5Q6N075 450 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 MMGT1Q8N4V1 131 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 SPATA4Q8NEY3 305 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 TAF4BQ92750 862 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 VWCEQ96DN2 955 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 CALR3Q96L12 384 aaKnown RBP15.41■□□□□ 0.06
CLN8-204ENST00000519254 CISHQ9NSE2 258 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 ZNF446Q9NWS9 450 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 GTF3C4Q9UKN8 822 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 AMFRQ9UKV5 643 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 RAB21Q9UL25 225 aa15.41■□□□□ 0.06
CLN8-204ENST00000519254 CASTOR2A6NHX0 329 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 KCNK3O14649 394 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 WEE2P0C1S8 567 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 CD58P19256 250 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 CYP3A5P20815 502 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 ATICP31939 592 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 PAFAH1B1P43034 410 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 RAP1GAPP47736 663 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 CFAP221Q4G0U5 840 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLN8-204ENST00000519254 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 CPA5Q8WXQ8 436 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 ZNF653Q96CK0 615 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 CYFIP2Q96F07 1278 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 ABHD8Q96I13 439 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 PBKQ96KB5 322 aa15.4■□□□□ 0.06
CLN8-204ENST00000519254 UPP2O95045 317 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 GATMP50440 423 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 TNNC1P63316 161 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 CENPCQ03188 943 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 GRIK3Q13003 919 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 NAA35Q5VZE5 725 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 SMYD5Q6GMV2 418 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 C11orf63Q6NUN7 778 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 TRIM72Q6ZMU5 477 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 MCOLN2Q8IZK6 566 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 ZNF606Q8WXB4 792 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 ZSWIM1Q9BR11 485 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 BCO2Q9BYV7 579 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 ARGLU1Q9NWB6 273 aaPredicted RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 ALG6Q9Y672 507 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 CCDC85CA6NKD9 419 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 TDRD15B5MCY1 1934 aaKnown RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 DDX3YO15523 660 aaKnown RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 THAP12O43422 761 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 SYN1P17600 705 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 SSTR3P32745 418 aaPredicted RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 CLCNKBP51801 687 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 NOMO3P69849 1222 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 NOMO2Q5JPE7 1267 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 MICAL3Q7RTP6 2002 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 LRRC52Q8N7C0 313 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 ZNF560Q96MR9 790 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 SMYD3Q9H7B4 428 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 VRTNQ9H8Y1 702 aa15.39■□□□□ 0.05
CLN8-204ENST00000519254 CNOT8Q9UFF9 292 aaKnown RBP15.39■□□□□ 0.05
CLN8-204ENST00000519254 PODXLO00592 558 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 PIRO00625 290 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 P4HA1P13674 534 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 MON1BQ7L1V2 547 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 PASD1Q8IV76 773 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 ZNF564Q8TBZ8 553 aaPredicted RBP15.38■□□□□ 0.05
CLN8-204ENST00000519254 BADQ92934 168 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 FAXDC2Q96IV6 333 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 PAAF1Q9BRP4 392 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 PDCL3Q9H2J4 239 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
CLN8-204ENST00000519254 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
CLN8-204ENST00000519254 UVRAGQ9P2Y5 699 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 SNX9Q9Y5X1 595 aa15.38■□□□□ 0.05
CLN8-204ENST00000519254 LRPAP1P30533 357 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 NSFP46459 744 aaKnown RBP15.37■□□□□ 0.05
CLN8-204ENST00000519254 TAF6P49848 677 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 CDH8P55286 799 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 RNASE9P60153 205 aaKnown RBP15.37■□□□□ 0.05
CLN8-204ENST00000519254 VSNL1P62760 191 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 BRD3Q15059 726 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 CC2D1AQ6P1N0 951 aaPredicted RBP15.37■□□□□ 0.05
CLN8-204ENST00000519254 NPAS4Q8IUM7 802 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 ACTRT1Q8TDG2 376 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
CLN8-204ENST00000519254 AVENQ9NQS1 362 aaPredicted RBP15.37■□□□□ 0.05
CLN8-204ENST00000519254 TBC1D13Q9NVG8 400 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms