RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TTYH3Q9C0H2 523 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 CNNM1Q9NRU3 951 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 RAD54BQ9Y620 910 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.72□□□□□ -1.65
SKP1-205ENST00000519054 ZAR1LA6NP61 321 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 MGST3O14880 152 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 PROM1O43490 865 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 TRIAP1O43715 76 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 CHRM2P08172 466 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 GCLCP48506 637 aaPredicted RBP4.71□□□□□ -1.66
SKP1-205ENST00000519054 PTH2RP49190 550 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 CLK3P49761 638 aaKnown RBP4.71□□□□□ -1.66
SKP1-205ENST00000519054 NANOS3P60323 173 aaKnown RBP4.71□□□□□ -1.66
SKP1-205ENST00000519054 TCF15Q12870 199 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 RBM20Q5T481 1227 aaKnown RBP4.71□□□□□ -1.66
SKP1-205ENST00000519054 FAM160B1Q5W0V3 765 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 KAZNQ674X7 775 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 OVCH2Q7RTZ1 564 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 COL23A1Q86Y22 540 aaPredicted RBP4.71□□□□□ -1.66
SKP1-205ENST00000519054 DNAJC10Q8IXB1 793 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 SIMC1Q8NDZ2 872 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 RUNDC1Q96C34 613 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 P2RX7Q99572 595 aaKnown RBP4.71□□□□□ -1.66
SKP1-205ENST00000519054 B3GNT5Q9BYG0 378 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 TPSD1Q9BZJ3 242 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 FOXJ2Q9P0K8 574 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 SPATA31A3Q5VYP0 1347 aa4.71□□□□□ -1.66
SKP1-205ENST00000519054 KAT6AQ92794 2004 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 MPPED1O15442 326 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 TSPAN6O43657 245 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 GRPP07492 148 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
SKP1-205ENST00000519054 CD6P30203 668 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.669e-7■■■■□ 24.3
SKP1-205ENST00000519054 MLC1Q15049 377 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 MINDY4Q4G0A6 757 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 ANO6Q4KMQ2 910 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 STRIP1Q5VSL9 837 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 TMEM108Q6UXF1 575 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 NPNTQ6UXI9 565 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 PEG10Q86TG7 708 aaKnown RBP4.7□□□□□ -1.66
SKP1-205ENST00000519054 TCEAL8Q8IYN2 117 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 MAGEB6Q8N7X4 407 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 CAGE1Q8TC20 777 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 PDLIM2Q96JY6 352 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 MRGPRX1Q96LB2 322 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 SLC46A1Q96NT5 459 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 CRAMP1Q96RY5 1269 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 HEPHQ9BQS7 1158 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 ACTRT3Q9BYD9 372 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 ZMAT3Q9HA38 289 aaKnown RBP4.7□□□□□ -1.66
SKP1-205ENST00000519054 KIAA1586Q9HCI6 787 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 HESX1Q9UBX0 185 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 TLK1Q9UKI8 766 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 INSL6Q9Y581 213 aa4.7□□□□□ -1.66
SKP1-205ENST00000519054 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
SKP1-205ENST00000519054 A0A1W2PPL8 197 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 VWC2LB2RUY7 222 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 DCLK1O15075 740 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 PPM1GO15355 546 aaPredicted RBP4.69□□□□□ -1.66
SKP1-205ENST00000519054 TUSC2O75896 110 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 SOAT2O75908 522 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 RHOP08100 348 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 KITP10721 976 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 NPR1P16066 1061 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 RARRES1P49788 294 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 ZNF134P52741 427 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 MAPK10P53779 464 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 ITIH3Q06033 890 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 LLGL1Q15334 1064 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 LONRF3Q496Y0 759 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 ARHGAP29Q52LW3 1261 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 VPS53Q5VIR6 699 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 KIAA0895LQ68EN5 471 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 NXNQ6DKJ4 435 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 TSR2Q969E8 191 aaKnown RBP4.69□□□□□ -1.66
SKP1-205ENST00000519054 OSBPL9Q96SU4 736 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 DUSP26Q9BV47 211 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 AMBRA1Q9C0C7 1298 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 PRDM13Q9H4Q3 707 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 ALG13Q9NP73 1137 aaKnown RBP4.69□□□□□ -1.66
SKP1-205ENST00000519054 PIH1D1Q9NWS0 290 aaKnown RBP4.69□□□□□ -1.66
SKP1-205ENST00000519054 KLHL42Q9P2K6 505 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 MED16Q9Y2X0 877 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 PLEKHM1Q9Y4G2 1056 aa4.69□□□□□ -1.66
SKP1-205ENST00000519054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.69□□□□□ -1.66
SKP1-205ENST00000519054 OVOL3O00110 214 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 PPFIA2O75334 1257 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 PDHA1P08559 390 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 AGFG1P52594 562 aaKnown RBP4.68□□□□□ -1.66
SKP1-205ENST00000519054 UCP3P55916 312 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 NXPH1P58417 271 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 LILRA4P59901 499 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 IQCB1Q15051 598 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 PTPRRQ15256 657 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 TXNRD1Q16881 649 aa4.68□□□□□ -1.66
SKP1-205ENST00000519054 NBPF8Q3BBV2 869 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms