RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SPATA31D4Q6ZUB0 917 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 TRMT1LQ7Z2T5 733 aaKnown RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 RAB11FIP4Q86YS3 637 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 GSTCDQ8NEC7 633 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 ST13P5Q8NFI4 369 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 SLC5A5Q92911 643 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 PGBD4Q96DM1 585 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 FAM126AQ9BYI3 521 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 MINDY3Q9H8M7 445 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 DISC1Q9NRI5 854 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 AGPAT5Q9NUQ2 364 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 MIOSQ9NXC5 875 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 SALL4Q9UJQ4 1053 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 RALYQ9UKM9 306 aaKnown RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 NAP1L2Q9ULW6 460 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 RBM8AQ9Y5S9 174 aaKnown RBP6.72□□□□□ -1.33
PABPC1-207ENST00000518716 SLC12A7Q9Y666 1083 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 CNTNAP2Q9UHC6 1331 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
PABPC1-207ENST00000518716 FRYQ5TBA9 3013 aa6.71□□□□□ -1.33
PABPC1-207ENST00000518716 TMEM150BA6NC51 233 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 CCDC69A6NI79 296 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 PDE2AO00408 941 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 MSH4O15457 936 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 POMCP01189 267 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 URODP06132 367 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 NFICP08651 508 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 CD72P21854 359 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 GLUD2P49448 558 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 IRX6P78412 446 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 CYP27A1Q02318 531 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 PRR16Q569H4 304 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 XKR3Q5GH77 459 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 PPM1JQ5JR12 505 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 EXOSC6Q5RKV6 272 aaKnown RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 ZBTB41Q5SVQ8 909 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 TTC22Q5TAA0 569 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 APOA5Q6Q788 366 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 TSSK4Q6SA08 328 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 VN1R5Q7Z5H4 357 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 PALB2Q86YC2 1186 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 EXOC6Q8TAG9 804 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 URGCPQ8TCY9 931 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 NETO1Q8TDF5 533 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 FGF13Q92913 245 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 NELL2Q99435 816 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 RIT2Q99578 217 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 GPR62Q9BZJ7 368 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 INO80BQ9C086 356 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 LSG1Q9H089 658 aaKnown RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 GBP3Q9H0R5 595 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 RWDD1Q9H446 243 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 RSAD1Q9HA92 442 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 TMEM63CQ9P1W3 806 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 SUCLA2Q9P2R7 463 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 FBXW11Q9UKB1 542 aa6.71□□□□□ -1.34
PABPC1-207ENST00000518716 PIN4Q9Y237 131 aaKnown RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 FNDC3AQ9Y2H6 1198 aaKnown RBP6.71□□□□□ -1.34
PABPC1-207ENST00000518716 LAMA5O15230 3695 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 FLNBO75369 2602 aaKnown RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 ARL5CA6NH57 179 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 PSMD10O75832 226 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 RETP07949 1114 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 HNRNPA1P09651 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 MYBP10242 640 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 CD8BP10966 210 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 HOXA9P31269 272 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 SFNP31947 248 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 JAK3P52333 1124 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 NTHL1P78549 312 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 EXOSC10Q01780 885 aaKnown RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 PFKPQ01813 784 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 MTAPQ13126 283 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 COL9A2Q14055 689 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 UBXN2BQ14CS0 331 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 NECTIN1Q15223 517 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 PFKFB3Q16875 520 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 LAIR1Q6GTX8 287 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 CAPN12Q6ZSI9 719 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 ANO5Q75V66 913 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 CATSPER4Q7RTX7 472 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 GRASPQ7Z6J2 395 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 MICU3Q86XE3 530 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 RHPN2Q8IUC4 686 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 CELF5Q8N6W0 485 aaKnown RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 RDM1Q8NG50 284 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 ITFG1Q8TB96 612 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 RUFY2Q8WXA3 655 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 SECISBP2LQ93073 1101 aaKnown RBP6.7□□□□□ -1.34
PABPC1-207ENST00000518716 B3GALT6Q96L58 329 aa6.7□□□□□ -1.34
PABPC1-207ENST00000518716 CLSTN3Q9BQT9 956 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms