RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TRIM43BA6NCK2 446 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 TOR1BO14657 336 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 APAF1O14727 1248 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 SUV39H1O43463 412 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 NARSO43776 548 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 PLIN1O60240 522 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 PQBP1O60828 265 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 ZFPL1O95159 310 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 SPDEFO95238 335 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 ATXN1LP0C7T5 689 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 C6P13671 934 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 SLC5A1P13866 664 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 TOB1P50616 345 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 TAP1Q03518 808 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 FPGSQ05932 587 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 SLC13A2Q13183 592 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 CTBP1Q13363 440 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 LONRF3Q496Y0 759 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 MAP9Q49MG5 647 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 ABHD17BQ5VST6 288 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 TAF2Q6P1X5 1199 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 KCNV1Q6PIU1 500 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 MICALCLQ6ZW33 695 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 CCDC146Q8IYE0 955 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 DNAJC5GQ8N7S2 189 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 PCSK9Q8NBP7 692 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 PSD4Q8NDX1 1056 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 NSUN7Q8NE18 718 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 TRIM43Q96BQ3 446 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 ZC3H10Q96K80 434 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 STRBPQ96SI9 672 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 OSBPL9Q96SU4 736 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 ZNF341Q9BYN7 854 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 UNKQ9C0B0 810 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 UNKLQ9H9P5 680 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 CPNE7Q9UBL6 633 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 AFF4Q9UHB7 1163 aaKnown RBP4.56□□□□□ -1.68
VPS13B-207ENST00000518569 FAM50BQ9Y247 325 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 PCDHGB6Q9Y5F9 930 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 RAD54BQ9Y620 910 aa4.56□□□□□ -1.68
VPS13B-207ENST00000518569 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 PIPSLA2A3N6 862 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MBD3L4A6NDZ8 208 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MBD3L3A6NE82 208 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MYO1CO00159 1063 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 PMM2O15305 246 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MAP4K4O95819 1239 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 NBPF7P0C2Y1 421 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 EGR2P11161 476 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MCM7P33993 719 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 GDF5P43026 501 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 GCLCP48506 637 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 UCP3P55916 312 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 SCAPQ12770 1279 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 IQCB1Q15051 598 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 PTPAQ15257 358 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 GEN1Q17RS7 908 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 SLC30A10Q6XR72 485 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 SESTD1Q86VW0 696 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 GAS2L3Q86XJ1 694 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 ADGRG5Q8IZF4 528 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 PROKR1Q8TCW9 393 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 SNX19Q92543 992 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MAML1Q92585 1016 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 NELL2Q99435 816 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 A1CFQ9NQ94 594 aaKnown RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 INTS13Q9NVM9 706 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 TBCCD1Q9NVR7 557 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 MRPS18AQ9NVS2 196 aaKnown RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 STK32BQ9NY57 414 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 COL20A1Q9P218 1284 aa4.55□□□□□ -1.68
VPS13B-207ENST00000518569 REXO2Q9Y3B8 237 aaKnown RBP4.55□□□□□ -1.68
VPS13B-207ENST00000518569 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 RHPN2P1A8MT19 583 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 TRIAP1O43715 76 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 LPXNO60711 386 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 VPS4BO75351 444 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 ZNF202O95125 648 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SRGNP10124 158 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 ITGALP20701 1170 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 TACR2P21452 398 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 NPTX2P47972 431 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 NDUFV1P49821 464 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 LOXL3P58215 753 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SATB1Q01826 763 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 IFIT5Q13325 482 aaKnown RBP4.54□□□□□ -1.68
VPS13B-207ENST00000518569 PICALMQ13492 652 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 TP53BP2Q13625 1128 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 BOP1Q14137 746 aaKnown RBP4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SFRP4Q6FHJ7 346 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-207ENST00000518569 GPR149Q86SP6 731 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 MICU3Q86XE3 530 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 ULK2Q8IYT8 1036 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 FAM9AQ8IZU1 332 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-207ENST00000518569 LNX2Q8N448 690 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SLC15A4Q8N697 577 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SLC46A1Q96NT5 459 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 MESP1Q9BRJ9 268 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms