RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 TTC30AQ86WT1 665 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 CHCHD4Q8N4Q1 142 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 MAB21L3Q8N8X9 362 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 CEP76Q8TAP6 659 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 C2orf15Q8WU43 125 aaKnown RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 CHFRQ96EP1 664 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 CNOT6LQ96LI5 555 aaKnown RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 DRC1Q96MC2 740 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 LPIN3Q9BQK8 851 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 TPSD1Q9BZJ3 242 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 CRISPLD1Q9H336 500 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 CCDC86Q9H6F5 360 aaKnown RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 ECT2Q9H8V3 914 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 KMT5AQ9NQR1 393 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 POLR3BQ9NW08 1133 aaPredicted RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 DUS2Q9NX74 493 aaKnown RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 ORC3Q9UBD5 711 aaPredicted RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 DSEQ9UL01 958 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 TBX20Q9UMR3 447 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 UBQLN1Q9UMX0 589 aaKnown RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 COL4A2P08572 1712 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 OPHN1O60890 802 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 TOM1L1O75674 476 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 SOAT2O75908 522 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 LARGE1O95461 756 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 CFIP05156 583 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 CLTAP09496 248 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 ENGP17813 658 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 MATR3P43243 847 aaKnown RBP eCLIP9.66□□□□□ -0.864e-7■□□□□ 10.6
PVT1-207ENST00000518528 NPTX2P47972 431 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.86
PVT1-207ENST00000518528 PEX3P56589 373 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 GFPT1Q06210 699 aaPredicted RBP9.66□□□□□ -0.86
PVT1-207ENST00000518528 SCAPQ12770 1279 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 TRIM29Q14134 588 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 ZNF268Q14587 947 aaPredicted RBP9.66□□□□□ -0.86
PVT1-207ENST00000518528 KYAT1Q16773 422 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 COL28A1Q2UY09 1125 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 LYSMD4Q5XG99 296 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 MON1AQ86VX9 555 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 METTL23Q86XA0 190 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 THEM5Q8N1Q8 247 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 USP13Q92995 863 aaPredicted RBP9.66□□□□□ -0.86
PVT1-207ENST00000518528 TSPAN18Q96SJ8 248 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 BHMT2Q9H2M3 363 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 FBRSL1Q9HCM7 1045 aaKnown RBP9.66□□□□□ -0.86
PVT1-207ENST00000518528 TUBGCP4Q9UGJ1 667 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 STK24Q9Y6E0 443 aa9.66□□□□□ -0.86
PVT1-207ENST00000518528 SPEGQ15772 3267 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 OTOL1A6NHN0 477 aaPredicted RBP9.65□□□□□ -0.86
PVT1-207ENST00000518528 CLDN3O15551 220 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 BCKDHBP21953 392 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 PROZP22891 400 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 U2AF2P26368 475 aaKnown RBP eCLIP9.65□□□□□ -0.862e-7■■□□□ 11.9
PVT1-207ENST00000518528 MCM7P33993 719 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 CCT6AP40227 531 aaKnown RBP9.65□□□□□ -0.86
PVT1-207ENST00000518528 SMTNP53814 917 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 PPP2R3AQ06190 1150 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 MTF1Q14872 753 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 DUOXA1Q1HG43 343 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 SLC39A12Q504Y0 691 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 SLC23A3Q6PIS1 610 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
PVT1-207ENST00000518528 RASSF3Q86WH2 238 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 TTC9BQ8N6N2 239 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 TTC16Q8NEE8 873 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 SPPL2BQ8TCT7 592 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 USP33Q8TEY7 942 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 WHAMMQ8TF30 809 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 OSCP1Q8WVF1 389 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
PVT1-207ENST00000518528 GTPBP2Q9BX10 602 aaKnown RBP9.65□□□□□ -0.86
PVT1-207ENST00000518528 C17orf75Q9HAS0 396 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 POLD4Q9HCU8 107 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 BCCIPQ9P287 314 aaKnown RBP eCLIP9.65□□□□□ -0.86
PVT1-207ENST00000518528 ARHGAP28Q9P2N2 729 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 UXTQ9UBK9 157 aaPredicted RBP9.65□□□□□ -0.86
PVT1-207ENST00000518528 SLC6A14Q9UN76 642 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 CCL26Q9Y258 94 aa9.65□□□□□ -0.86
PVT1-207ENST00000518528 GCN1Q92616 2671 aaKnown RBP9.64□□□□□ -0.87
PVT1-207ENST00000518528 ZBTB24O43167 697 aaPredicted RBP9.64□□□□□ -0.87
PVT1-207ENST00000518528 NFATC1O95644 943 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 SYPP08247 313 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 USP17L7P0C7H9 530 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 CSH1P0DML2 217 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 CSH2P0DML3 217 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 NLRP12P59046 1061 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 MRPS21P82921 87 aaKnown RBP9.64□□□□□ -0.87
PVT1-207ENST00000518528 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
PVT1-207ENST00000518528 SCRN1Q12765 414 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms