RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 LRPAP1P30533 357 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 ACLYP53396 1101 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 NFX1Q12986 1120 aaKnown RBP12.5□□□□□ -0.41
SPIDR-203ENST00000517693 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-203ENST00000517693 FAM26DQ5JW98 314 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 DCUN1D2Q6PH85 259 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 RHOT1Q8IXI2 618 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
SPIDR-203ENST00000517693 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 PGBD4Q96DM1 585 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 ZMAT2Q96NC0 199 aaKnown RBP12.5□□□□□ -0.41
SPIDR-203ENST00000517693 PNKPQ96T60 521 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPIDR-203ENST00000517693 HESX1Q9UBX0 185 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 TUBGCP4Q9UGJ1 667 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 HES2Q9Y543 173 aa12.5□□□□□ -0.41
SPIDR-203ENST00000517693 M0QYV0 167 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 PIRO00625 290 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 CTSHP09668 335 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 NDST1P52848 882 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 CDH8P55286 799 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 VSNL1P62760 191 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 LCLAT1Q6UWP7 414 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 HDXQ7Z353 690 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
SPIDR-203ENST00000517693 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 FNIP1Q8TF40 1166 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 C18orf8Q96DM3 657 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 TNIP3Q96KP6 325 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 ELOVL4Q9GZR5 314 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-203ENST00000517693 RASAL2Q9UJF2 1139 aa12.49□□□□□ -0.41
SPIDR-203ENST00000517693 ARHGEF37A1IGU5 675 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 KPNA7A9QM74 516 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 KBTBD13C9JR72 458 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 O00370 1275 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 HUS1O60921 280 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 MICAL2O94851 1124 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 CALCAP01258 141 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 CHRNA1P02708 482 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 INHAP05111 366 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 GRK4P32298 578 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 VEGFBP49765 207 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-203ENST00000517693 ACAP1Q15027 740 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 PTPROQ16827 1216 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 TOP6BLQ8N6T0 577 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 KRT12Q99456 494 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 ERVK-5Q9HDB9 667 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 ZNF623O75123 536 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 ZRANB2O95218 330 aaKnown RBP eCLIP12.48□□□□□ -0.41
SPIDR-203ENST00000517693 THP07101 528 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 RPL9P32969 192 aaKnown RBP12.48□□□□□ -0.41
SPIDR-203ENST00000517693 GABRB2P47870 512 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 PEX5P50542 639 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 EPHB4P54760 987 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
SPIDR-203ENST00000517693 ODF2Q5BJF6 829 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 LRRC38Q5VT99 294 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 NIPA2Q8N8Q9 360 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 C18orf25Q96B23 403 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-203ENST00000517693 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 RAB17Q9H0T7 212 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
SPIDR-203ENST00000517693 TMEM191CA6NGB0 347 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
SPIDR-203ENST00000517693 CFHP08603 1231 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 CHRNA3P32297 505 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 GBP1P32455 592 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 SLC8A3P57103 927 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 RNASE9P60153 205 aaKnown RBP12.47□□□□□ -0.41
SPIDR-203ENST00000517693 HTRA3P83110 453 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 PDCLQ13371 301 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 CUL1Q13616 776 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 DCAF12L1Q5VU92 463 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 ARHGAP17Q68EM7 881 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 SCARA3Q6AZY7 606 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 EMBQ6PCB8 327 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 MRPL10Q7Z7H8 261 aaKnown RBP12.47□□□□□ -0.41
SPIDR-203ENST00000517693 ZDHHC17Q8IUH5 632 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 OR6B3Q8NGW1 331 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 ALG3Q92685 438 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 RBM41Q96IZ5 413 aaKnown RBP12.47□□□□□ -0.41
SPIDR-203ENST00000517693 BTBD6Q96KE9 485 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 PPP1R10Q96QC0 940 aaKnown RBP12.47□□□□□ -0.41
SPIDR-203ENST00000517693 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
SPIDR-203ENST00000517693 STARD7Q9NQZ5 370 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms