RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 HOMEZQ8IX15 550 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 ACER1Q8TDN7 264 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 WDR83Q9BRX9 315 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 TRIM55Q9BYV6 548 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 SLC24A2Q9UI40 661 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 TBX20Q9UMR3 447 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 CYP1A1P04798 512 aaPredicted RBP13.02□□□□□ -0.32
PCM1-203ENST00000517545 MORF4L2Q15014 288 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 ANKRD22Q5VYY1 191 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 CENPUQ71F23 418 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 IL31RAQ8NI17 732 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 FBXO27Q8NI29 283 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 ZNF398Q8TD17 642 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 GATA6Q92908 595 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 SKA1Q96BD8 255 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 FGD4Q96M96 766 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 PAFAH2Q99487 392 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 TSSK1BQ9BXA7 367 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 SYNCQ9H7C4 482 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 KCNH7Q9NS40 1196 aa13.02□□□□□ -0.32
PCM1-203ENST00000517545 SAE1Q9UBE0 346 aaPredicted RBP13.02□□□□□ -0.32
PCM1-203ENST00000517545 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
PCM1-203ENST00000517545 HNRNPCL1O60812 293 aaKnown RBP13.02□□□□□ -0.33
PCM1-203ENST00000517545 AP1B1Q10567 949 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 FNBP1LQ5T0N5 605 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 CEP128Q6ZU80 1094 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 APLFQ8IW19 511 aaPredicted RBP13.02□□□□□ -0.33
PCM1-203ENST00000517545 ZFAND2BQ8WV99 257 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 STMN2Q93045 179 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 MXRA8Q9BRK3 442 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 STX18Q9P2W9 335 aaKnown RBP13.02□□□□□ -0.33
PCM1-203ENST00000517545 PCDHB2Q9Y5E7 798 aa13.02□□□□□ -0.33
PCM1-203ENST00000517545 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.02□□□□□ -0.33
PCM1-203ENST00000517545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 DENND3A2RUS2 1198 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 ZCCHC18P0CG32 403 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 PLCB3Q01970 1234 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 CYP24A1Q07973 514 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 MZB1Q8WU39 189 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 SGK1O00141 431 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 KRT1P04264 644 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 ESRRAP11474 423 aaPredicted RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 SERPINB4P48594 390 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 GCNT1Q02742 428 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 LMNB2Q03252 620 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 HIF1AQ16665 826 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 FAM182AQ5T1J6 154 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 C3orf62Q6ZUJ4 267 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 TRIM11Q96F44 468 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 RIT2Q99578 217 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 DBNDD1Q9H9R9 158 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 C1orf112Q9NSG2 853 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 CDK16Q00536 496 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 ZYXQ15942 572 aaKnown RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 ALYREFQ86V81 257 aaKnown RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 NMUR2Q9GZQ4 415 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 ARHGEF4Q9NR80 690 aa13.01□□□□□ -0.33
PCM1-203ENST00000517545 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.01□□□□□ -0.33
PCM1-203ENST00000517545 E5RJQ4 531 aa13□□□□□ -0.33
PCM1-203ENST00000517545 MAP3K7O43318 606 aa13□□□□□ -0.33
PCM1-203ENST00000517545 RNF8O76064 485 aa13□□□□□ -0.33
PCM1-203ENST00000517545 DLDP09622 509 aaKnown RBP13□□□□□ -0.33
PCM1-203ENST00000517545 BGNP21810 368 aa13□□□□□ -0.33
PCM1-203ENST00000517545 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
PCM1-203ENST00000517545 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
PCM1-203ENST00000517545 NPTX2P47972 431 aa13□□□□□ -0.33
PCM1-203ENST00000517545 ARL4CP56559 192 aa13□□□□□ -0.33
PCM1-203ENST00000517545 NOMO3P69849 1222 aa13□□□□□ -0.33
PCM1-203ENST00000517545 OASLQ15646 514 aaKnown RBP13□□□□□ -0.33
PCM1-203ENST00000517545 MDH1BQ5I0G3 518 aa13□□□□□ -0.33
PCM1-203ENST00000517545 LIN9Q5TKA1 542 aa13□□□□□ -0.33
PCM1-203ENST00000517545 PYROXD1Q8WU10 500 aa13□□□□□ -0.33
PCM1-203ENST00000517545 MFSD14AQ96MC6 490 aa13□□□□□ -0.33
PCM1-203ENST00000517545 ZNF184Q99676 751 aaPredicted RBP13□□□□□ -0.33
PCM1-203ENST00000517545 FAM213AQ9BRX8 229 aa13□□□□□ -0.33
PCM1-203ENST00000517545 FAM237BA0A1B0GVD1 139 aa13□□□□□ -0.33
PCM1-203ENST00000517545 RARBP10826 455 aa13□□□□□ -0.33
PCM1-203ENST00000517545 MYL2P10916 166 aa13□□□□□ -0.33
PCM1-203ENST00000517545 GYS1P13807 737 aa13□□□□□ -0.33
PCM1-203ENST00000517545 GDF10P55107 478 aa13□□□□□ -0.33
PCM1-203ENST00000517545 WNT7BP56706 349 aa13□□□□□ -0.33
PCM1-203ENST00000517545 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
PCM1-203ENST00000517545 RHPN2Q8IUC4 686 aa13□□□□□ -0.33
PCM1-203ENST00000517545 PPFIBP2Q8ND30 876 aa13□□□□□ -0.33
PCM1-203ENST00000517545 BSNDQ8WZ55 320 aa13□□□□□ -0.33
PCM1-203ENST00000517545 TTC17Q96AE7 1141 aa13□□□□□ -0.33
PCM1-203ENST00000517545 CLPTM1LQ96KA5 538 aa13□□□□□ -0.33
PCM1-203ENST00000517545 FAM161BQ96MY7 647 aa13□□□□□ -0.33
PCM1-203ENST00000517545 FAM111AQ96PZ2 611 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms