RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 LRRC6Q86X45 466 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 KATNAL2Q8IYT4 538 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FBXO36Q8NEA4 188 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 LZICQ8WZA0 190 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 JADE3Q92613 823 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 APBB2Q92870 758 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CDHR1Q96JP9 859 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 DMAP1Q9NPF5 467 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FEM1BQ9UK73 627 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 PCDHA2Q9Y5H9 948 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 NKRFO15226 690 aaKnown RBP eCLIP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 MTA2O94776 668 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 SPATA31C1P0DKV0 1188 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CIITAP33076 1130 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ERFP50548 548 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 VCPP55072 806 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 DLGAP5Q15398 846 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CDC42EP5Q6NZY7 148 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 VSTM1Q6UX27 236 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 LCA5Q86VQ0 697 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CBWD2Q8IUF1 395 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TIAM2Q8IVF5 1701 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 LINC00116Q8NCU8 138 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FAM210AQ96ND0 272 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 MCEEQ96PE7 176 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 DRC3Q9H069 523 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 MRPL40Q9NQ50 206 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ZC3H7BQ9UGR2 993 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 LRP6O75581 1613 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 KPNA7A9QM74 516 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CFLARO15519 480 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 HLA-DRAP01903 254 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CYP3A4P08684 503 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TPBGLP0DKB5 382 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 EIF2AK2P19525 551 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ADRA1DP25100 572 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CCND2P30279 289 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 GSTT1P30711 240 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 COPAP53621 1224 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CACNB3P54284 484 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TPD52P55327 224 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 PPP2R5CQ13362 524 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 CHI3L2Q15782 390 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TFDP3Q5H9I0 405 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 SPOCD1Q6ZMY3 1216 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TRIM50Q86XT4 487 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ZC3H3Q8IXZ2 948 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 VCPIP1Q96JH7 1222 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 GORASP1Q9BQQ3 440 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 MXRA8Q9BRK3 442 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 KLHL4Q9C0H6 718 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 NRBP2Q9NSY0 501 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 MARCOQ9UEW3 520 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 AGO2Q9UKV8 859 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TBX20Q9UMR3 447 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TCP10L2B9ZVM9 353 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TRIM49D1C9J1S8 452 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 KRT36O76013 467 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 BGNP21810 368 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 SP100P23497 879 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 PSMC1P62191 440 aaKnown RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 EFHC1Q5JVL4 640 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 DCAF12L1Q5VU92 463 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FAM196AQ6ZSG2 479 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 OTOP1Q7RTM1 612 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 NET1Q7Z628 596 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FAM228AQ86W67 206 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 GABPB2Q8TAK5 448 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 APOPT1Q96IL0 206 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FAXDC2Q96IV6 333 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 ADPGKQ9BRR6 497 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 APOL6Q9BWW8 343 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 SLCO1B3Q9NPD5 702 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 RBAKQ9NYW8 714 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-203ENST00000517490 STRNO43815 780 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 CST8O60676 142 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 HNRNPCP07910 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 KRT10P13645 584 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 GCNT1Q02742 428 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 PPP3CAQ08209 521 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 GRIK3Q13003 919 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 MTERF2Q49AM1 385 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 C4orf50Q6ZRC1 276 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 OTOAQ7RTW8 1153 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 TAS1R2Q8TE23 839 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SCYL1Q96KG9 808 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 PCSK1NQ9UHG2 260 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 EML1O00423 815 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 KRT3P12035 628 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 IL1R1P14778 569 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 TFAMQ00059 246 aaKnown RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 FMO1Q01740 532 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 C1QBPQ07021 282 aaKnown RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 R3HDM1Q15032 1099 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms