RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 GDAQ9Y2T3 454 aa10.49□□□□□ -0.73
PTPN20-228ENST00000513266 UTP20O75691 2785 aaKnown RBP10.49□□□□□ -0.73
PTPN20-228ENST00000513266 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 OR4Q2P0C623 313 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 GP1BBP13224 206 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 GLRA2P23416 452 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 RHDQ02161 417 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 CYP4A11Q02928 519 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 SGMS1Q86VZ5 419 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 CPA6Q8N4T0 437 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 TTC9BQ8N6N2 239 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 HMGB4Q8WW32 186 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 IL21RQ9HBE5 538 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTPN20-228ENST00000513266 NID2Q14112 1375 aa10.48□□□□□ -0.73
PTPN20-228ENST00000513266 SGK1O00141 431 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 PODXLO00592 558 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 SOAT2O75908 522 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 FGF19O95750 216 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
PTPN20-228ENST00000513266 ARL2P36404 184 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 USP11P51784 963 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 MYO1EQ12965 1108 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 BYSLQ13895 437 aaKnown RBP10.47□□□□□ -0.73
PTPN20-228ENST00000513266 PDGFRLQ15198 375 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 PRICKLE2Q7Z3G6 844 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 SFTPA1Q8IWL2 248 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 ALLCQ8N6M5 410 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 CCDC26Q8TAB7 109 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 ETNPPLQ8TBG4 499 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 BAP1Q92560 729 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 CDC6Q99741 560 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 LRRC2Q9BYS8 371 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 USP20Q9Y2K6 914 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 ASB3Q9Y575 518 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 ITPR3Q14573 2671 aa10.47□□□□□ -0.73
PTPN20-228ENST00000513266 CACNA1DQ01668 2161 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 SPTBN1Q01082 2364 aaKnown RBP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 N4BP3O15049 544 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 TDP2O95551 362 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 ZNF883P0CG24 379 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 MCM5P33992 734 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 OPRD1P41143 372 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 SCRN1Q12765 414 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 PTPRNQ16849 979 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 PFKFB3Q16875 520 aaPredicted RBP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 Q4G0T1 1027 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 PKDCCQ504Y2 493 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 EEF1DP3Q658K8 133 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 CENPPQ6IPU0 288 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 CC2D1AQ6P1N0 951 aaPredicted RBP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 DBX2Q6ZNG2 339 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 C4orf19Q8IY42 314 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 IL17RCQ8NAC3 791 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 TXNDC5Q8NBS9 432 aaKnown RBP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 TTC9Q92623 222 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 DDX12PQ92771 950 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 PRIMPOLQ96LW4 560 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 HSPA12BQ96MM6 686 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 LNPKQ9C0E8 428 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 TDP1Q9NUW8 608 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 SRPK3Q9UPE1 567 aa10.46□□□□□ -0.73
PTPN20-228ENST00000513266 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.73
PTPN20-228ENST00000513266 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 SMIM28A0A1B0GU29 152 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 MARCH6O60337 910 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 DKC1O60832 514 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTPN20-228ENST00000513266 ADAM23O75077 832 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 KLF8O95600 359 aaPredicted RBP10.45□□□□□ -0.74
PTPN20-228ENST00000513266 EDN1P05305 212 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 P4HBP07237 508 aaKnown RBP10.45□□□□□ -0.74
PTPN20-228ENST00000513266 CDC25CP30307 473 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 ADSSP30520 456 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 AVPR1AP37288 418 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 MRPS21P82921 87 aaKnown RBP10.45□□□□□ -0.74
PTPN20-228ENST00000513266 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 BFSP1Q12934 665 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 FAM187BQ17R55 369 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 GAB4Q2WGN9 574 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 EML3Q32P44 896 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 PREPLQ4J6C6 727 aaPredicted RBP10.45□□□□□ -0.74
PTPN20-228ENST00000513266 CCDC157Q569K6 752 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 APOA5Q6Q788 366 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 SLC36A4Q6YBV0 504 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 TMEM150AQ86TG1 271 aa10.45□□□□□ -0.74
PTPN20-228ENST00000513266 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms