RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 CCDC150Q8NCX0 1101 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 OR6B3Q8NGW1 331 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 C2orf15Q8WU43 125 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 RPGRIP1Q96KN7 1286 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 NECAB3Q96P71 396 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 SRRTQ9BXP5 876 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 IMPG2Q9BZV3 1241 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 WDR6Q9NNW5 1121 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 HSFX1Q9UBD0 423 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 CDH22Q9UJ99 828 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 CDH9Q9ULB4 789 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 NR2E1Q9Y466 385 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 INSL5Q9Y5Q6 135 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 SCN1AP35498 2009 aa7.66□□□□□ -1.18
PDLIM5-215ENST00000511586 C19orf67A6NJJ6 358 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 LOC730098B7Z3J9 87 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 DLL1O00548 723 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 CLUHO75153 1309 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 VNN2O95498 520 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PDGFRBP09619 1106 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 CCDC192P0DO97 292 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PTPN2P17706 415 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 LMO2P25791 158 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 ERCC5P28715 1186 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SSTR3P32745 418 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 DEKP35659 375 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 ALDH1A3P47895 512 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 MXI1P50539 228 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PLXNA3P51805 1871 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 EPHB3P54753 998 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 TWF1Q12792 350 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PLD1Q13393 1074 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 MAPRE1Q15691 268 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 NFE2Q16621 373 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 TPD52L1Q16890 204 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 DPCR1Q3MIW9 517 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 INTS6LQ5JSJ4 861 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 CCDC183Q5T5S1 534 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 IQCEQ6IPM2 695 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SASS6Q6UVJ0 657 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 RBM43Q6ZSC3 357 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 OTOP3Q7RTS5 596 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 GRASPQ7Z6J2 395 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 OSTM1Q86WC4 334 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 ELMOD1Q8N336 334 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 FBXL13Q8NEE6 735 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 FEZF2Q8TBJ5 459 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SPPL2BQ8TCT7 592 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 TAS1R2Q8TE23 839 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 KBTBD7Q8WVZ9 684 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SLC35C1Q96A29 364 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 ACSF2Q96CM8 615 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 ZNF512Q96ME7 567 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SYT15Q9BQS2 421 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 MRPL45Q9BRJ2 306 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PI4K2AQ9BTU6 479 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 RTN4Q9NQC3 1192 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 RAB20Q9NX57 234 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 ABI2Q9NYB9 513 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 GTF3C4Q9UKN8 822 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 USTQ9Y2C2 406 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SLC27A5Q9Y2P5 690 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 YIPF1Q9Y548 306 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 PCDHB5Q9Y5E4 795 aa7.65□□□□□ -1.18
PDLIM5-215ENST00000511586 SPTBN5Q9NRC6 3674 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 A8MXQ7 604 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 TNFRSF10AO00220 468 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 ZNF197O14709 1029 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 PMM2O15305 246 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 HCRTO43612 131 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 N4BP1O75113 896 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 HAPLN1P10915 354 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 PTPN1P18031 435 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SP100P23497 879 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 FSHRP23945 695 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CDH8P55286 799 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 NOP14P78316 857 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 NTHL1P78549 312 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CETN1Q12798 172 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 MGAT5BQ3V5L5 792 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CBWD6Q4V339 395 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 PABPC1LQ4VXU2 614 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CBWD3Q5JTY5 395 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CBWD5Q5RIA9 395 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SPOPLQ6IQ16 392 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CAVIN1Q6NZI2 390 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 FAM171BQ6P995 826 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SCARA5Q6ZMJ2 495 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 C4orf50Q6ZRC1 276 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CREBRFQ8IUR6 639 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SPATA2LQ8IUW3 424 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 TRIM59Q8IWR1 403 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 TTC9BQ8N6N2 239 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 TDRD5Q8NAT2 981 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SEMA4DQ92854 862 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms