RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 KLHL10Q6JEL2 608 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 SCARA5Q6ZMJ2 495 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 CLEC17AQ6ZS10 378 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 SV2AQ7L0J3 742 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 METTL23Q86XA0 190 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 ZC3H3Q8IXZ2 948 aaKnown RBP14.56□□□□□ -0.08
SNF8-206ENST00000509989 FAM186BQ8IYM0 893 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 ZDHHC14Q8IZN3 488 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 TMC2Q8TDI7 906 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 CRTAC1Q9NQ79 661 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 NXF1Q9UBU9 619 aaKnown RBP14.56□□□□□ -0.08
SNF8-206ENST00000509989 DPP7Q9UHL4 492 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 GTF3C4Q9UKN8 822 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 PDGFBP01127 241 aaPredicted RBP14.55□□□□□ -0.08
SNF8-206ENST00000509989 HLA-DRAP01903 254 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 LRG1P02750 347 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 ORC1Q13415 861 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 PTPN21Q16825 1174 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 EDRF1Q3B7T1 1238 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 ZACNQ401N2 412 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 PABPC1LQ4VXU2 614 aaKnown RBP14.55□□□□□ -0.08
SNF8-206ENST00000509989 STXBP5Q5T5C0 1151 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 TMC8Q8IU68 726 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 GPIHBP1Q8IV16 184 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 TOP6BLQ8N6T0 577 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 TAS1R2Q8TE23 839 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 GIPC2Q8TF65 315 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 SEMA4DQ92854 862 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 FGF13Q92913 245 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 FGF14Q92915 247 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 MCRS1Q96EZ8 462 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 ZSWIM3Q96MP5 696 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 MMS19Q96T76 1030 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 SEPT5Q99719 369 aaPredicted RBP14.55□□□□□ -0.08
SNF8-206ENST00000509989 APOBEC3GQ9HC16 384 aaKnown RBP14.55□□□□□ -0.08
SNF8-206ENST00000509989 ABI2Q9NYB9 513 aaPredicted RBP14.55□□□□□ -0.08
SNF8-206ENST00000509989 DSEQ9UL01 958 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 CTNND2Q9UQB3 1225 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 USTQ9Y2C2 406 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 NR2E1Q9Y466 385 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 NCANO14594 1321 aa14.55□□□□□ -0.08
SNF8-206ENST00000509989 PHACTR2O75167 634 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 XYLBO75191 536 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 POU2F2P09086 479 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 MYL4P12829 197 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 LAMP2P13473 410 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 PTPN2P17706 415 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 PAX3P23760 479 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 CCNE1P24864 410 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 CYP2F1P24903 491 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 PSMC2P35998 433 aaKnown RBP14.54□□□□□ -0.08
SNF8-206ENST00000509989 ZXDAP98168 799 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 MYO1EQ12965 1108 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 TRPC3Q13507 836 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 MTMR3Q13615 1198 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 NCOA4Q13772 614 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 INTS6LQ5JSJ4 861 aaKnown RBP14.54□□□□□ -0.08
SNF8-206ENST00000509989 IER5LQ5T953 404 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 TTI2Q6NXR4 508 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 ELMSAN1Q6PJG2 1045 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 PARM1Q6UWI2 310 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 CYP26C1Q6V0L0 522 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 OTOP3Q7RTS5 596 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 NPAS3Q8IXF0 933 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 THEM5Q8N1Q8 247 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 GPT2Q8TD30 523 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 LRFN3Q9BTN0 628 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 PLA2G2FQ9BZM2 168 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 KCNK12Q9HB15 430 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 TMEM30AQ9NV96 361 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 HMGXB4Q9UGU5 601 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 FRMD4BQ9Y2L6 1034 aa14.54□□□□□ -0.08
SNF8-206ENST00000509989 KIF26AQ9ULI4 1882 aaPredicted RBP14.54□□□□□ -0.08
SNF8-206ENST00000509989 KMT2EQ8IZD2 1858 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 MAPK13O15264 365 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 KIF20AO95235 890 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 HAPLN1P10915 354 aaPredicted RBP14.53□□□□□ -0.08
SNF8-206ENST00000509989 WARSP23381 471 aaKnown RBP14.53□□□□□ -0.08
SNF8-206ENST00000509989 CACNA2D1P54289 1103 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 MCCD1P59942 119 aaPredicted RBP14.53□□□□□ -0.08
SNF8-206ENST00000509989 MGAT5BQ3V5L5 792 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 SHKBP1Q8TBC3 707 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 NELFBQ8WX92 580 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 EDAQ92838 391 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 ACBD6Q9BR61 282 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 CLSTN2Q9H4D0 955 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 KIAA1468Q9P260 1216 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 EPS15L1Q9UBC2 864 aa14.53□□□□□ -0.08
SNF8-206ENST00000509989 MRPS23Q9Y3D9 190 aaKnown RBP14.53□□□□□ -0.08
SNF8-206ENST00000509989 NUP210Q8TEM1 1887 aaPredicted RBP14.52□□□□□ -0.08
SNF8-206ENST00000509989 STAU1O95793 577 aaKnown RBP14.52□□□□□ -0.09
SNF8-206ENST00000509989 RPL13P26373 211 aaKnown RBP14.52□□□□□ -0.09
SNF8-206ENST00000509989 HTR4Q13639 388 aa14.52□□□□□ -0.09
SNF8-206ENST00000509989 TEAD2Q15562 447 aa14.52□□□□□ -0.09
SNF8-206ENST00000509989 DDR2Q16832 855 aa14.52□□□□□ -0.09
SNF8-206ENST00000509989 ZNF699Q32M78 642 aa14.52□□□□□ -0.09
SNF8-206ENST00000509989 CBWD6Q4V339 395 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms