RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ASB7Q9H672 318 aa15.77■□□□□ 0.12
PHF3-209ENST00000509330 ZFYVE28Q9HCC9 887 aa15.77■□□□□ 0.12
PHF3-209ENST00000509330 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.12
PHF3-209ENST00000509330 SCINQ9Y6U3 715 aa15.77■□□□□ 0.12
PHF3-209ENST00000509330 PSMC1P62191 440 aaKnown RBP15.77■□□□□ 0.11
PHF3-209ENST00000509330 SIX1Q15475 284 aaPredicted RBP15.77■□□□□ 0.11
PHF3-209ENST00000509330 SLC27A1Q6PCB7 646 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 TRPV1Q8NER1 839 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 RUBCNQ92622 972 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 ERP44Q9BS26 406 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 RABEP2Q9H5N1 569 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 ZWILCHQ9H900 591 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 DNAJC17Q9NVM6 304 aaKnown RBP15.77■□□□□ 0.11
PHF3-209ENST00000509330 PLAAQ9Y263 795 aa15.77■□□□□ 0.11
PHF3-209ENST00000509330 MICAL2O94851 1124 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 DARSP14868 501 aaKnown RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 EIF4BP23588 611 aaKnown RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 RFC1P35251 1148 aaPredicted RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.114e-6■■■■□ 24
PHF3-209ENST00000509330 DHX9Q08211 1270 aaKnown RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 PPP1R7Q15435 360 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 UBAP2Q5T6F2 1119 aaKnown RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 FBXO25Q8TCJ0 367 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 APBA2Q99767 749 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 MRPL45Q9BRJ2 306 aaKnown RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 BCO2Q9BYV7 579 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 MED4Q9NPJ6 270 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.76■□□□□ 0.11
PHF3-209ENST00000509330 TRIP11Q15643 1979 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 CILPO75339 1184 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 HSD17B3P37058 310 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 CPT1AP50416 773 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 CUL1Q13616 776 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 SNX17Q15036 470 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 CYP4F22Q6NT55 531 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 ACOT1Q86TX2 421 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 LRRC4CQ9HCJ2 640 aa15.76■□□□□ 0.11
PHF3-209ENST00000509330 METTL5Q9NRN9 209 aaKnown RBP15.76■□□□□ 0.11
PHF3-209ENST00000509330 TULP2O00295 520 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 ERBB2P04626 1255 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 CALB1P05937 261 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 GRM5P41594 1212 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
PHF3-209ENST00000509330 YARSP54577 528 aaKnown RBP15.75■□□□□ 0.11
PHF3-209ENST00000509330 RBP5P82980 135 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 NFX1Q12986 1120 aaKnown RBP15.75■□□□□ 0.11
PHF3-209ENST00000509330 UAP1Q16222 522 aaPredicted RBP15.75■□□□□ 0.11
PHF3-209ENST00000509330 TTMPQ5BVD1 217 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 NOTUMQ6P988 496 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 CCDC25Q86WR0 208 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 RHOT1Q8IXI2 618 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 PCSK1NQ9UHG2 260 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 GOLGA6CA6NDK9 693 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 TMEM191CA6NGB0 347 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 KRT1P04264 644 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 SLC10A3P09131 477 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 PDGFRBP09619 1106 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 GOLGA6DP0CG33 693 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 CHRNA3P32297 505 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 PTGIRP43119 386 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 DYNLT1P63172 113 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 ODF2Q5BJF6 829 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 CEP85LQ5SZL2 805 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 PIWIL1Q96J94 861 aaKnown RBP15.75■□□□□ 0.11
PHF3-209ENST00000509330 FMO2Q99518 471 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 RAB17Q9H0T7 212 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 GOLGA6AQ9NYA3 693 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 MEIS3P2A8K0S8 358 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 PSMA2P25787 234 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 YWHAEP62258 255 aaKnown RBP15.75■□□□□ 0.11
PHF3-209ENST00000509330 USP6NLQ92738 828 aa15.75■□□□□ 0.11
PHF3-209ENST00000509330 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
PHF3-209ENST00000509330 KRT3P12035 628 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 CYP3A5P20815 502 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 IGFBP6P24592 240 aaPredicted RBP15.74■□□□□ 0.11
PHF3-209ENST00000509330 SLC1A1P43005 524 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 CAP1Q01518 475 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 DMTNQ08495 405 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 RAB6CQ53S08 254 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 ZNF618Q5T7W0 954 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 DUPD1Q68J44 220 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 TWF2Q6IBS0 349 aaKnown RBP15.74■□□□□ 0.11
PHF3-209ENST00000509330 TRIB2Q92519 343 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 RAB6CQ9H0N0 254 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 ASIC3Q9UHC3 531 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 TSPAN16Q9UKR8 245 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 SCN1AP35498 2009 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 SMIM35A0A1B0GVV1 85 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 SMIM23A6NLE4 172 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 PURAQ00577 322 aaKnown RBP15.74■□□□□ 0.11
PHF3-209ENST00000509330 CDO1Q16878 200 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 OR6B3Q8NGW1 331 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 VCPIP1Q96JH7 1222 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 SNX27Q96L92 541 aa15.74■□□□□ 0.11
PHF3-209ENST00000509330 ZFP42Q96MM3 310 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms