RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SLC39A12Q504Y0 691 aa21.6■■□□□ 1.05
HOXC6-204ENST00000509328 CAVIN1Q6NZI2 390 aaKnown RBP21.6■■□□□ 1.05
HOXC6-204ENST00000509328 TRIM59Q8IWR1 403 aa21.6■■□□□ 1.05
HOXC6-204ENST00000509328 ADAMTS19Q8TE59 1207 aa21.6■■□□□ 1.05
HOXC6-204ENST00000509328 SMG7Q92540 1137 aaKnown RBP21.6■■□□□ 1.05
HOXC6-204ENST00000509328 SNX25Q9H3E2 840 aa21.6■■□□□ 1.05
HOXC6-204ENST00000509328 CDH22Q9UJ99 828 aa21.6■■□□□ 1.05
HOXC6-204ENST00000509328 C5orf42Q9H799 3197 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 MTMR11A4FU01 709 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 XYLBO75191 536 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 VNN2O95498 520 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 POU2F2P09086 479 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 ACAT1P24752 427 aaKnown RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 GNL1P36915 607 aaPredicted RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 NOP14P78316 857 aaKnown RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 STX1AQ16623 288 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 CBWD6Q4V339 395 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 INTS6LQ5JSJ4 861 aaKnown RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 CBWD3Q5JTY5 395 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 CBWD5Q5RIA9 395 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 LRRTM3Q86VH5 581 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 FEZF2Q8TBJ5 459 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 C2orf15Q8WU43 125 aaKnown RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 ELMO3Q96BJ8 720 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 MRPL45Q9BRJ2 306 aaKnown RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 PI4K2AQ9BTU6 479 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 PHF7Q9BWX1 381 aaPredicted RBP21.59■■□□□ 1.05
HOXC6-204ENST00000509328 PIDD1Q9HB75 910 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 ANO10Q9NW15 660 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 RAB20Q9NX57 234 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 HSFX1Q9UBD0 423 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 COQ4Q9Y3A0 265 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 INSL5Q9Y5Q6 135 aa21.59■■□□□ 1.05
HOXC6-204ENST00000509328 N4BP1O75113 896 aaKnown RBP21.58■■□□□ 1.05
HOXC6-204ENST00000509328 LRG1P02750 347 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 FMO5P49326 533 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 SPOPLQ6IQ16 392 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 ADHFE1Q8IWW8 467 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 OR6B3Q8NGW1 331 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 SEMA4DQ92854 862 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 POMKQ9H5K3 350 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 THAP9Q9H5L6 903 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 SMYD3Q9H7B4 428 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 CDH9Q9ULB4 789 aa21.58■■□□□ 1.05
HOXC6-204ENST00000509328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.58■■□□□ 1.05
HOXC6-204ENST00000509328 PTPRDP23468 1912 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 PMM2O15305 246 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 CCL16O15467 120 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 HCRTO43612 131 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 LMO2P25791 158 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 DUSP4Q13115 394 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 NFE2Q16621 373 aaPredicted RBP21.57■■□□□ 1.04
HOXC6-204ENST00000509328 SCARA5Q6ZMJ2 495 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 FAM114A1Q8IWE2 563 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 ATAD1Q8NBU5 361 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 SPPL2BQ8TCT7 592 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 CNOT6LQ96LI5 555 aaKnown RBP21.57■■□□□ 1.04
HOXC6-204ENST00000509328 PKMYT1Q99640 499 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 SYT15Q9BQS2 421 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 NIF3L1Q9GZT8 377 aa21.57■■□□□ 1.04
HOXC6-204ENST00000509328 APOBEC3GQ9HC16 384 aaKnown RBP21.57■■□□□ 1.04
HOXC6-204ENST00000509328 WDR6Q9NNW5 1121 aaKnown RBP21.57■■□□□ 1.04
HOXC6-204ENST00000509328 NOTCH4Q99466 2003 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 P4HA2O15460 535 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 LRRN2O75325 713 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 PDGFRBP09619 1106 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 ASPAP45381 313 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 CDH8P55286 799 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 ZP2Q05996 745 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 KCNH2Q12809 1159 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 PLD1Q13393 1074 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 WDR44Q5JSH3 913 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 FAM171BQ6P995 826 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 IRF2BP1Q8IU81 584 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 FAXDC2Q96IV6 333 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 BCO2Q9BYV7 579 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 CRISPLD1Q9H336 500 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.56■■□□□ 1.047e-7■■■■■ 155.2
HOXC6-204ENST00000509328 TMLHEQ9NVH6 421 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 GTF3C4Q9UKN8 822 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 SLC27A5Q9Y2P5 690 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 YIPF1Q9Y548 306 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 PCDHB5Q9Y5E4 795 aa21.56■■□□□ 1.04
HOXC6-204ENST00000509328 A8MXQ7 604 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 AFPP02771 609 aaKnown RBP21.55■■□□□ 1.04
HOXC6-204ENST00000509328 RAP1GAPP47736 663 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 TUFMP49411 452 aaKnown RBP21.55■■□□□ 1.04
HOXC6-204ENST00000509328 TWF1Q12792 350 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 CETN1Q12798 172 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 MAPRE1Q15691 268 aaKnown RBP21.55■■□□□ 1.04
HOXC6-204ENST00000509328 CREBRFQ8IUR6 639 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 ENOX1Q8TC92 643 aaKnown RBP21.55■■□□□ 1.04
HOXC6-204ENST00000509328 UHRF1Q96T88 793 aaPredicted RBP21.55■■□□□ 1.04
HOXC6-204ENST00000509328 SDCBP2Q9H190 292 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 CYP3A43Q9HB55 503 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 ABI2Q9NYB9 513 aaPredicted RBP21.55■■□□□ 1.04
HOXC6-204ENST00000509328 NME7Q9Y5B8 376 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 CLUHO75153 1309 aa21.55■■□□□ 1.04
HOXC6-204ENST00000509328 MYBPHLA2RUH7 354 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 ATP2C2O75185 946 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms