RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CATSPER4Q7RTX7 472 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 HOOK3Q86VS8 718 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 IPO4Q8TEX9 1081 aaKnown RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 ART4Q93070 314 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 C18orf8Q96DM3 657 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 CPB2Q96IY4 423 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 FAM84AQ96KN4 292 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 SNX27Q96L92 541 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 TXLNGYQ9BZA5 131 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 CELF4Q9BZC1 486 aaKnown RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 OSBPL8Q9BZF1 889 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 ZFYVE28Q9HCC9 887 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 SETD4Q9NVD3 440 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.78□□□□□ -0.84
HTT-205ENST00000509043 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 ANK1P16157 1881 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 SHOX2O60902 331 aaPredicted RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 ITGBL1O95965 494 aaPredicted RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 IVLP07476 585 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CFHP08603 1231 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 SLC10A3P09131 477 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 KRT3P12035 628 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 AKR1A1P14550 325 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CYP3A5P20815 502 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 HOXC8P31273 242 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 LMAN1P49257 510 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CDR1P51861 262 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CRYBB1P53674 252 aaPredicted RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 DHX9Q08211 1270 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 PPP1R7Q15435 360 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TTC27Q6P3X3 843 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 LCLAT1Q6UWP7 414 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 SCARA5Q6ZMJ2 495 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TRMT10CQ7L0Y3 403 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 ADAT2Q7Z6V5 191 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 IFNL1Q8IU54 200 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 ZDHHC17Q8IUH5 632 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TMEM192Q8IY95 271 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 WDTC1Q8N5D0 677 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CCDC89Q8N998 374 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 SLC4A11Q8NBS3 891 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 STK32AQ8WU08 396 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TFAP2BQ92481 460 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 KAT2BQ92831 832 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 ELMO3Q96BJ8 720 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 ATP6V1G3Q96LB4 118 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 ZNF560Q96MR9 790 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TRIM51Q9BSJ1 452 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 TMEM109Q9BVC6 243 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 DCLK3Q9C098 648 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 DPH5Q9H2P9 285 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 PABPC3Q9H361 631 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 SYNCQ9H7C4 482 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CYLDQ9NQC7 956 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 GRHL1Q9NZI5 618 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CWC15Q9P013 229 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 CHORDC1Q9UHD1 332 aaPredicted RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 CPA4Q9UI42 421 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 UBQLN1Q9UMX0 589 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 PLAAQ9Y263 795 aa9.77□□□□□ -0.85
HTT-205ENST00000509043 DRG1Q9Y295 367 aaKnown RBP9.77□□□□□ -0.85
HTT-205ENST00000509043 RALGAPA2Q2PPJ7 1873 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 C17orf102A2RUQ5 167 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 H0YGN5 161 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 O00370 1275 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 IGF2BP3O00425 579 aaKnown RBP eCLIP9.76□□□□□ -0.85
HTT-205ENST00000509043 MEFVO15553 781 aaPredicted RBP9.76□□□□□ -0.85
HTT-205ENST00000509043 ECM2O94769 699 aaPredicted RBP9.76□□□□□ -0.85
HTT-205ENST00000509043 NPTXRO95502 500 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 CALCAP01258 141 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 RARGP13631 454 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 KCNE1P15382 129 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 HOXA11P31270 313 aaPredicted RBP9.76□□□□□ -0.85
HTT-205ENST00000509043 RDXP35241 583 aaKnown RBP9.76□□□□□ -0.85
HTT-205ENST00000509043 PCK1P35558 622 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 ACTN2P35609 894 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 SCNN1AP37088 669 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 PMS2P54278 862 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 PSMC1P62191 440 aaKnown RBP9.76□□□□□ -0.85
HTT-205ENST00000509043 NKX3-2P78367 333 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 TRADDQ15628 312 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 ZBTB6Q15916 424 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 ZNF394Q53GI3 561 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 XKR4Q5GH76 650 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 TFDP3Q5H9I0 405 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 DENND1BQ6P3S1 775 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 ZDHHC24Q6UX98 284 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 ALKAL1Q6UXT8 129 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 KDM7AQ6ZMT4 941 aa9.76□□□□□ -0.85
HTT-205ENST00000509043 VSIG1Q86XK7 387 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms