RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CRTAC1Q9NQ79 661 aa19.5■□□□□ 0.71
CLDND1-220ENST00000508902 EPS15L1Q9UBC2 864 aa19.5■□□□□ 0.71
CLDND1-220ENST00000508902 ZNF318Q5VUA4 2279 aa19.5■□□□□ 0.71
CLDND1-220ENST00000508902 MYBPHLA2RUH7 354 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 XYLBO75191 536 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 CEBPBP17676 345 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 FSHRP23945 695 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 CCNE1P24864 410 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 ELF1P32519 619 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 RAP1GAPP47736 663 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 GCLMP48507 274 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 GPR15P49685 360 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 NCOA4Q13772 614 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 PABPC1LQ4VXU2 614 aaKnown RBP19.49■□□□□ 0.71
CLDND1-220ENST00000508902 INTS6LQ5JSJ4 861 aaKnown RBP19.49■□□□□ 0.71
CLDND1-220ENST00000508902 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 METTL23Q86XA0 190 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 NPAS3Q8IXF0 933 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 TMEM86AQ8N2M4 240 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 APOBEC3GQ9HC16 384 aaKnown RBP19.49■□□□□ 0.71
CLDND1-220ENST00000508902 ZNF334Q9HCZ1 680 aaPredicted RBP19.49■□□□□ 0.71
CLDND1-220ENST00000508902 MAFFQ9ULX9 164 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 FRMD4BQ9Y2L6 1034 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 COL4A3Q01955 1670 aa19.49■□□□□ 0.71
CLDND1-220ENST00000508902 LRG1P02750 347 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 LAMP2P13473 410 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 WARSP23381 471 aaKnown RBP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 GBP2P32456 591 aaPredicted RBP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 PSMC2P35998 433 aaKnown RBP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 EPHA5P54756 1037 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 PSMC1P62191 440 aaKnown RBP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 ZXDAP98168 799 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 MYO1EQ12965 1108 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 BIRC3Q13489 604 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 WDR72Q3MJ13 1102 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 TAS1R2Q8TE23 839 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 FGF13Q92913 245 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 ACBD6Q9BR61 282 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 CORO1BQ9BR76 489 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 PI4K2AQ9BTU6 479 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 MKNK1Q9BUB5 465 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 RPP25Q9BUL9 199 aaKnown RBP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 DPEP3Q9H4B8 488 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 AVENQ9NQS1 362 aaPredicted RBP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.48■□□□□ 0.71
CLDND1-220ENST00000508902 KIAA1468Q9P260 1216 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 GTF3C4Q9UKN8 822 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 NCANO14594 1321 aa19.48■□□□□ 0.71
CLDND1-220ENST00000508902 HLA-DRAP01903 254 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 HAPLN1P10915 354 aaPredicted RBP19.47■□□□□ 0.71
CLDND1-220ENST00000508902 GJA1P17302 382 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 CDH8P55286 799 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 KLHL10Q6JEL2 608 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 FAM171BQ6P995 826 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 SCARA5Q6ZMJ2 495 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 INTS8Q75QN2 995 aaKnown RBP19.47■□□□□ 0.71
CLDND1-220ENST00000508902 DPH6Q7L8W6 267 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 THEM5Q8N1Q8 247 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 SPATA18Q8TC71 538 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 GPT2Q8TD30 523 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 SEMA4DQ92854 862 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 SYT15Q9BQS2 421 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 KCNK12Q9HB15 430 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 TMEM30AQ9NV96 361 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 ABI2Q9NYB9 513 aaPredicted RBP19.47■□□□□ 0.71
CLDND1-220ENST00000508902 NXF1Q9UBU9 619 aaKnown RBP19.47■□□□□ 0.71
CLDND1-220ENST00000508902 HMGXB4Q9UGU5 601 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 HOOK1Q9UJC3 728 aaKnown RBP19.47■□□□□ 0.71
CLDND1-220ENST00000508902 CTNND2Q9UQB3 1225 aa19.47■□□□□ 0.71
CLDND1-220ENST00000508902 ANHXE9PGG2 379 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 IKBKBO14920 756 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 TACC1O75410 805 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 ASS1P00966 412 aaKnown RBP19.46■□□□□ 0.71
CLDND1-220ENST00000508902 RPL13P26373 211 aaKnown RBP19.46■□□□□ 0.71
CLDND1-220ENST00000508902 AP3M2P53677 418 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 ENPEPQ07075 957 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 TRPC3Q13507 836 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 HTR4Q13639 388 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 ZNF699Q32M78 642 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 SDHAF4Q5VUM1 108 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 SHKBP1Q8TBC3 707 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 GPR152Q8TDT2 470 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 NELFBQ8WX92 580 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 EDAQ92838 391 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 FGF14Q92915 247 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 ASIC4Q96FT7 647 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 MMS19Q96T76 1030 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 SEPT5Q99719 369 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-220ENST00000508902 MMRN2Q9H8L6 949 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 CDH7Q9ULB5 785 aa19.46■□□□□ 0.71
CLDND1-220ENST00000508902 COL4A2P08572 1712 aa19.45■□□□□ 0.7
CLDND1-220ENST00000508902 ANAPC1Q9H1A4 1944 aa19.45■□□□□ 0.7
CLDND1-220ENST00000508902 ZNF638Q14966 1978 aaKnown RBP19.45■□□□□ 0.7
CLDND1-220ENST00000508902 CETN3O15182 167 aa19.45■□□□□ 0.7
CLDND1-220ENST00000508902 NARSO43776 548 aaKnown RBP19.45■□□□□ 0.7
CLDND1-220ENST00000508902 PHACTR2O75167 634 aa19.45■□□□□ 0.7
CLDND1-220ENST00000508902 PDGFRBP09619 1106 aa19.45■□□□□ 0.7
CLDND1-220ENST00000508902 PTPN2P17706 415 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms